1
tesis de grado
Publicado 2001
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Universidad Nacional Agraria La Molina. Facultad de Ciencias. Departamento Académico de Biología
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artículo
Publicado 2024
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The soil microbiome, a crucial component of agricultural ecosystems, plays a pivotal role in crop production and ecosystem functioning. However, its response to traditional tillage systems in potato cultivation in the Peruvian highlands is still far from understood. Here, ecological and functional aspects of the bacterial community were analyzed based on soil samples from two traditional tillage systems: 'chiwa' (minimal tillage) and 'barbecho' (full tillage), in the Huanuco region of the Peruvian central Andes. Similar soil bacterial community composition was shown for minimal tillage system, but it was heterogeneous for full tillage system. This soil bacterial community composition under full tillage system may be attributed to stochastic, and a more dynamic environment within this tillage system. 'Chiwa' and 'barbecho' soils harbored distinct bacterial genera into their communities, i...
3
artículo
Publicado 2024
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Las especies de Passiflora supersect. Tacsonia (Juss.) Feuillet & J.M. MacDougal son plantas adaptadas a los ecosistemas andinos que producen frutos comestibles. Estos son cultivados y comercializados a pequeña escala para su consumo como fruta fresca y para la elaboración de postres y bebidas. Ante las fuertes perturbaciones antrópicas y ambientales que sufre el hábitat natural de las especies de Passiflora L., la extinción parcial o total de ellas es una realidad latente. Por ello, con el fin de conservar estos recursos en Bancos de Germoplasma, es necesario el desarrollo de métodos óptimos para la propagación de las distintas especies. Con la intención de conservar ex situ, en la Colección de Passiflora del Banco de Germoplasma del Instituto Nacional de Innovación Agraria (INIA) a las especies de Passiflora supersect. Tacsonia, se verificó la viabilidad del uso de Passiflo...
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objeto de conferencia
Publicado 2022
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Between 2011–2013, yellow rust unleashed one of the most important phytosanitary crises in the coffee sector in Peru, causing a negative impact on the rural family economy. One of the factors associated with the intensification of the disease was the predominance of susceptible cultivars in agricultural systems. Faced with the need to rehabilitate the coffee park with new cultivars, the National Institute for Agrarian Innovation (INIA) has managed the installation of basic coffee germplasm for the development of the yellow rust resistance program, which is made up of 169 introductions from the departments of Pasco, Junín, Huánuco, Ucayali, Cajamarca, and Amazonas and obtained from 2015. The objective of the study was to evaluate the incidence and severity of epidemic conditions in the field and characterize the components of horizontal resistance, using the method of inoculations of ...
5
artículo
Publicado 2020
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The domestic South American camelid Vicugna pacos L. is distributed along Peru, Chile, Bolivia, and Argentina. Here, we contribute to the bioinformatics and evolutionary systematics of the Camelidae by performing high-throughput sequencing analysis on the black Huacaya breed of V. pacos from Puno, Peru. The black Huacaya breed mitogenome is 16,664 base pairs (bp) in length and contains 37 genes (GenBank accession MT044302). The mitogenome shares a high-level of gene synteny to other Camelidae (Camelops, Camelus, Lama, and Vicugna). The mitogenome of the black Huacaya breed of V. pacos situates it in a clade with V. vicugna Molina, sister to Lama. We anticipate that further mitogenome sequencing of different breeds from Vicugna pacos will improve our understanding of the evolutionary history of this taxon.
6
artículo
Publicado 2019
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En el presente estudio, se ha reconstruido la secuencia completa del genoma plastidial del maíz morado peruano y se ha comparado con otros genomas plastidiales de maíces. El genoma plastidial tiene una longitud de 140,458 pb y muestra una estructura típica del genoma del cloroplasto: un par de regiones repetidas invertidas (IRa e IRb) de 22,594 pb, una región Larga de Copia Única (LSC) de 82,472 pb, y una región Corta de Copia Única (SSC) de 12,798 pb. Las relaciones filogenéticas fueron obtenidas a partir de alineamientos genómicos completos con los genomas plastidiales de otros miembros del género Zea. Los resultados indicaron que el maíz morado peruano está más relacionado a Z. mays subsp. huehuetenangensis. Es posible que eventos de hibridación introgresiva a lo largo de la evolución del maíz morado hayan jugado un papel en la adquisición del fenotipo morado en el cl...
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8
artículo
Publicado 2020
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The 5.5-Mb genome sequence of Bacillus thuringiensis strain UNMSM10RA, isolated from potato crop soil, is reported in this study. The strain UNMSM10RA contains 5,347 protein-coding sequences, 105 tRNA genes, 15 rRNA genes, and 5 noncoding RNA (ncRNA) genes, with an average G+C content of 35.1%. Within protein-coding genes, 31 were detected and identified in the metabolism of heavy metals such as arsenic, cadmium, and copper. Further analyses will be performed and provide more information for understanding the evolution of these Bacillus thuringiensis strains and their potential uses.
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preprint
Publicado 2024
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The article is a preprint, it is important to consider that it is not peer-reviewed
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artículo
Plant DNA and RNA extraction methods are well established, with a wide range of protocols, depending on the purposes of each laboratory/research. Nowadays, quick, inexpensive and easy plant DNA and RNA extraction methods are highly sought after. We developed an optimized protocol for plant DNA and RNA extraction that uses an inexpensive bench drill and plastic bags and does not require liquid nitrogen. DNA from leaves and RNA from leaves and roots of banana, pineapple, citrus, papaya, passion fruit and cassava, were extracted using a basic cetyltrimethylammonium bromide method. Both nucleic acids were quantified and evaluated for quality based on agarose gel electrophoresis. The DNA and RNA extractions were successful for all species, and RNA quality in pellets was maintained after storage at room temperature for three weeks. This protocol can reduce costs considerably in laboratories wi...
11
artículo
Publicado 2023
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Coffee leaf rust (Hemileia vastatrix) is the most important disease in coffee crops around the world. Currently, there is limited knowledge about mass production methodologies and ex-situ infection of H. vastatrix that lead to the development of different health characterization studies of Coffea or disease phenotyping. In this context, the aim of this research was to develop a simple protocol for the mass production of coffee rust uredospores under controlled conditions and to determine their infection in coffee seedlings. Uredospores of H. vastatrix were collected from infected plants in the “Chontal” coffee-growing area in San Martín, Peru. The viability of uredospore germination was evaluated, and a uredospores suspension (2 x 105 uredospores/mL) was prepared to inoculate coffee seedlings. Incidence and sporulation rates were evaluated after 43 days of inoculation. During the mu...
12
artículo
Publicado 2023
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Coffee leaf rust (Hemileia vastatrix) is the most important disease in coffee crops around the world. Currently, there is limited knowledge about mass production methodologies and ex-situ infection of H. vastatrix that lead to the development of different health characterization studies of Coffea or disease phenotyping. In this context, the aim of this research was to develop a simple protocol for the mass production of coffee rust uredospores under controlled conditions and to determine their infection in coffee seedlings. Uredospores of H. vastatrix were collected from infected plants in the “Chontal” coffee-growing area in San Martín, Peru. The viability of uredospore germination was evaluated, and a uredospores suspension (2 x 105 uredospores/mL) was prepared to inoculate coffee seedlings. Incidence and sporulation rates were evaluated after 43 days of inoculation. During the mu...
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artículo
Publicado 2022
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Peru is an important center of diversity for maize; its different cultivars have been adapted to distinct altitudes and water availability and possess an array of kernel colors (red, blue, and purple), which are highly appreciated by local populations. Specifically, Peruvian purple maize is a collection of native landraces selected and maintained by indigenous cultures due to its intense purple color in the seed, bract, and cob. This color is produced by anthocyanin pigments, which have gained interest due to their potential use in the food, agriculture, and pharmaceutical industry. It is generally accepted that the Peruvian purple maize originated from a single ancestral landrace ‘Kculli’, but it is not well understood. To study the origin of the Peruvian purple maize, we assembled the plastid genomes of the new cultivar ‘INIA 601’ with a high concentration of anthocyanins, comp...
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documento de trabajo
Publicado 2023
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Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 gr...
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artículo
Publicado 2023
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Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 gr...
16
artículo
Publicado 2020
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Tomato susceptibility/resistance to stem canker disease caused by Alternaria alternata f. sp. lycopersici and its pathogenic factor AAL-toxin is determined by the presence of the Asc1 gene. Several cultivars of commercial tomato (Solanum lycopersicum var. lycopersicum, SLL) are reported to have a mutation in Asc1, resulting in their susceptibility to AAL-toxin. We evaluated 119 ancestral tomato accessions including S. pimpinellifolium (SP), S. lycopersicum var. cerasiforme (SLC) and S. lycopersicum var. lycopersicum “jitomate criollo” (SLJ) for AAL-toxin susceptibility. Three accessions, SP PER018805, SLC PER018894, and SLJ M5-3, were susceptible to AAL-toxin. SLC PER018894 and SLJ M5-3 had a two-nucleotide deletion (nt 854_855del) in Asc1 identical to that found in SLL cv. Aichi-first. Another mutation (nt 931_932insT) that may confer AAL-toxin susceptibility was identified in SP PE...
