Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates
Descripción del Articulo
Bartonella bacilliformis is the etiologic agent of Carrion's disease, which if endemic to Peru. Studies on antimicrobial resistance genes from clinical isolates of this pathogen are scarce, and the molecular characteristics of these genes and their region resistance-associated are currently unk...
Autores: | , , , , , , , , , , |
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Formato: | artículo |
Fecha de Publicación: | 2014 |
Institución: | Universidad Nacional Mayor de San Marcos |
Repositorio: | Revistas - Universidad Nacional Mayor de San Marcos |
Lenguaje: | español |
OAI Identifier: | oai:ojs.csi.unmsm:article/8251 |
Enlace del recurso: | https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/8251 |
Nivel de acceso: | acceso abierto |
Materia: | Susceptibilidad antimicrobiana Bartonella bacilliformis ParC ParE quinolonas. antimicrobial susceptibility quinolones. |
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Revistas - Universidad Nacional Mayor de San Marcos |
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dc.title.none.fl_str_mv |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates Caracterización molecular de la región determinante de resistencia a quinolonas (QRDR) de la topoisomerasa IV de Bartonella bacilliformis en aislados clínicos |
title |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates |
spellingShingle |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates Espinoza-Culupú, Abraham Susceptibilidad antimicrobiana Bartonella bacilliformis ParC ParE quinolonas. antimicrobial susceptibility Bartonella bacilliformis ParC ParE quinolones. |
title_short |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates |
title_full |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates |
title_fullStr |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates |
title_full_unstemmed |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates |
title_sort |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolates |
dc.creator.none.fl_str_mv |
Espinoza-Culupú, Abraham Quispe-Gaspar, Ruth Jaramillo, Michael Icho, Melisa Eca, Anika Ramírez, Pablo Alvarado, Débora Guerrero, Juan Carlos Vargas-Vásquez, Franklin Córdova, Ofelia García-de-la-Guarda, Ruth |
author |
Espinoza-Culupú, Abraham |
author_facet |
Espinoza-Culupú, Abraham Quispe-Gaspar, Ruth Jaramillo, Michael Icho, Melisa Eca, Anika Ramírez, Pablo Alvarado, Débora Guerrero, Juan Carlos Vargas-Vásquez, Franklin Córdova, Ofelia García-de-la-Guarda, Ruth |
author_role |
author |
author2 |
Quispe-Gaspar, Ruth Jaramillo, Michael Icho, Melisa Eca, Anika Ramírez, Pablo Alvarado, Débora Guerrero, Juan Carlos Vargas-Vásquez, Franklin Córdova, Ofelia García-de-la-Guarda, Ruth |
author2_role |
author author author author author author author author author author |
dc.subject.none.fl_str_mv |
Susceptibilidad antimicrobiana Bartonella bacilliformis ParC ParE quinolonas. antimicrobial susceptibility Bartonella bacilliformis ParC ParE quinolones. |
topic |
Susceptibilidad antimicrobiana Bartonella bacilliformis ParC ParE quinolonas. antimicrobial susceptibility Bartonella bacilliformis ParC ParE quinolones. |
description |
Bartonella bacilliformis is the etiologic agent of Carrion's disease, which if endemic to Peru. Studies on antimicrobial resistance genes from clinical isolates of this pathogen are scarce, and the molecular characteristics of these genes and their region resistance-associated are currently unknown. In this work we made the molecular characterization of the quinolone-resistance, and establish the region (QRDR) for the topoisomerase IV, which is encoded by the parC and parE genes, as well as develop an antimicrobial susceptibility test for B. bacilliformis. 65 Blood samples from La Libertad, Cusco, Ancash and Piura were processed on Blood Agar plates and incubated at 30 °C, 5% CO2. The antimicrobial susceptibility was determined, then the genomic DNA extracted, aforementioned genes amplified, their sequence determined and it analyzed using bioinformatics tools. Six positive cultures were obtained. The isolates were susceptible to Ciprofloxacin (except one strain from Quillabamba – Cusco, which showed decreased susceptibility) and were resistant to Nalidixic Acid. From the sequence analysis of B. bacilliformis ParC and ParE there have been shown amino acid differences compared to the respective protein sequences from E. coli K12 MG1655, which is likely to confer resistance to Nalidixic Acid but not to Ciprofloxacin. It was determined that B. bacilliformis ParC and ParE proteins QRDRs are comprised between amino acids 67 to 118 and 473 to 530, respectively. The antibiogram and the minimal inhibitory concentration are best assessed using the #1 McFarland standards after a 6-day incubation period. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-04-14 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/8251 10.15381/rpb.v21i1.8251 |
url |
https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/8251 |
identifier_str_mv |
10.15381/rpb.v21i1.8251 |
dc.language.none.fl_str_mv |
spa |
language |
spa |
dc.relation.none.fl_str_mv |
https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/8251/7194 |
dc.rights.none.fl_str_mv |
https://creativecommons.org/licenses/by-nc-sa/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidad Nacional Mayor de San Marcos, Facultad de Ciencias Biológicas |
publisher.none.fl_str_mv |
Universidad Nacional Mayor de San Marcos, Facultad de Ciencias Biológicas |
dc.source.none.fl_str_mv |
Revista Peruana de Biología; Vol. 21 Núm. 1 (2014); 089 - 098 Revista Peruana de Biología; Vol. 21 No. 1 (2014); 089 - 098 1727-9933 1561-0837 reponame:Revistas - Universidad Nacional Mayor de San Marcos instname:Universidad Nacional Mayor de San Marcos instacron:UNMSM |
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Universidad Nacional Mayor de San Marcos |
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UNMSM |
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UNMSM |
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Revistas - Universidad Nacional Mayor de San Marcos |
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Revistas - Universidad Nacional Mayor de San Marcos |
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spelling |
Molecular characterization of quinolones resistance determining region (QRDR) of Bartonella bacilliformis topoisomerasa IV in clinical isolatesCaracterización molecular de la región determinante de resistencia a quinolonas (QRDR) de la topoisomerasa IV de Bartonella bacilliformis en aislados clínicosEspinoza-Culupú, AbrahamQuispe-Gaspar, RuthJaramillo, MichaelIcho, MelisaEca, AnikaRamírez, PabloAlvarado, DéboraGuerrero, Juan CarlosVargas-Vásquez, FranklinCórdova, OfeliaGarcía-de-la-Guarda, RuthSusceptibilidad antimicrobianaBartonella bacilliformisParCParEquinolonas.antimicrobial susceptibilityBartonella bacilliformisParCParEquinolones.Bartonella bacilliformis is the etiologic agent of Carrion's disease, which if endemic to Peru. Studies on antimicrobial resistance genes from clinical isolates of this pathogen are scarce, and the molecular characteristics of these genes and their region resistance-associated are currently unknown. In this work we made the molecular characterization of the quinolone-resistance, and establish the region (QRDR) for the topoisomerase IV, which is encoded by the parC and parE genes, as well as develop an antimicrobial susceptibility test for B. bacilliformis. 65 Blood samples from La Libertad, Cusco, Ancash and Piura were processed on Blood Agar plates and incubated at 30 °C, 5% CO2. The antimicrobial susceptibility was determined, then the genomic DNA extracted, aforementioned genes amplified, their sequence determined and it analyzed using bioinformatics tools. Six positive cultures were obtained. The isolates were susceptible to Ciprofloxacin (except one strain from Quillabamba – Cusco, which showed decreased susceptibility) and were resistant to Nalidixic Acid. From the sequence analysis of B. bacilliformis ParC and ParE there have been shown amino acid differences compared to the respective protein sequences from E. coli K12 MG1655, which is likely to confer resistance to Nalidixic Acid but not to Ciprofloxacin. It was determined that B. bacilliformis ParC and ParE proteins QRDRs are comprised between amino acids 67 to 118 and 473 to 530, respectively. The antibiogram and the minimal inhibitory concentration are best assessed using the #1 McFarland standards after a 6-day incubation period.Bartonella bacilliformis es el agente etiológico de la Enfermedad de Carrión, endémica del Perú. Pocas investigaciones han sido realizadas acerca de los genes asociados a la resistencia antimicrobiana en aislados clínicos de este patógeno. Estos genes no están caracterizados molecularmente, ni se conoce la región asociada a dicha resistencia. Por ello, el objetivo del este trabajo fue caracterizar molecularmente la región determinante de la resistencia a las quinolonas (QRDR) en la topoisomerasa IV, que está codificada por los genes parC y parE, así como también desarrollar una prueba de susceptibilidad antimicrobiana para B. bacilliformis. Las muestras sanguíneas de 65 pacientes procedentes de La Libertad, Cusco, Ancash y Piura, se sembraron en placas de agar sangre e incubaron a 30 °C con 5% CO2. Luego se procedió a: (1) determinar la susceptibilidad antimicrobiana y (2) extraer el DNA genómico, amplificar los genes mencionados, secuenciarlos y analizarlos mediante herramientas bioinformáticas. Se obtuvieron 6 cultivos positivos. Los aislados fueron sensibles a la ciprofloxacina (excepto uno procedente de Quillabamba-Cusco, que presentó susceptibilidad disminuida) y resistentes al ácido nalidíxico. Del análisis de las secuencias aminoacídicas de ParC y ParE de B. bacilliformis se concluye que presentan diferencias aminoacídicas en comparación con las secuencias de las proteínas respectivas de E. coli K12 MG1655, que probablemente confieran resistencia al ácido nalidíxico pero no a la ciprofloxacina. Se determinó que las QRDR de las proteínas ParC y ParE de B. bacilliformis están comprendidas entre los aminoácidos 67 al 118 y 473 al 530, respectivamente. El antibiograma y la concentración mínima inhibitoria se evalúan mejor usando inóculos a escala 1 de McFarland y a los 6 días de incubación.Universidad Nacional Mayor de San Marcos, Facultad de Ciencias Biológicas2014-04-14info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/825110.15381/rpb.v21i1.8251Revista Peruana de Biología; Vol. 21 Núm. 1 (2014); 089 - 098Revista Peruana de Biología; Vol. 21 No. 1 (2014); 089 - 0981727-99331561-0837reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/8251/7194Derechos de autor 2014 Abraham Espinoza-Culupú, Ruth Quispe-Gaspar, Michael Jaramillo, Melisa Icho, Anika Eca, Pablo Ramírez, Débora Alvarado, Juan Carlos Guerrero, Franklin Vargas-Vásquez, Ofelia Córdova, Ruth García-de-la-Guardahttps://creativecommons.org/licenses/by-nc-sa/4.0info:eu-repo/semantics/openAccessoai:ojs.csi.unmsm:article/82512020-05-20T19:35:48Z |
score |
13.959421 |
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La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).