Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing

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Monitoring agroforestry systems remains challenging due to canopy heterogeneity and the coexistence of species with contrasting dynamics. While field-based methods offer high accuracy, they are inefficient for rapid and multitemporal structural assessments. This study integrated LiDAR and multispect...

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Detalles Bibliográficos
Autores: Sánchez Fuentes, Teiser, Gómez Fernández, Darwin, Fernandez Jibaja, Jorge Antonio, Oblitas Troyes, Jhon Franklin, Chuquibala Checan, Beimer, Tafur Culqui, Josué, Quichua Baldeon, Rosalia, Taboada Mitma, Víctor Hugo, Tineo Flores, Daniel, Goñas Goñas, Malluri, Atalaya Marin, Nilton
Formato: artículo
Fecha de Publicación:2026
Institución:Instituto Nacional de Innovación Agraria
Repositorio:INIA-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.inia.gob.pe:20.500.12955/3125
Enlace del recurso:http://hdl.handle.net/20.500.12955/3125
https://doi.org/10.1016/j.rsase.2026.101966
Nivel de acceso:acceso abierto
Materia:LiDAR
Multispectral Mapping
Mapeo multiespectral
Canopy
Dosel
Terra
https://purl.org/pe-repo/ocde/ford#4.01.00
Agroforestry; Agroforestería; Remote sensing; Teledetección; Forest; Bosque; Tropical zones; Zona tropical; Monitoring; Vigilancia; Vegetation; Vegetación
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dc.title.none.fl_str_mv Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
title Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
spellingShingle Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
Sánchez Fuentes, Teiser
LiDAR
Multispectral Mapping
Mapeo multiespectral
Canopy
Dosel
Terra
https://purl.org/pe-repo/ocde/ford#4.01.00
Agroforestry; Agroforestería; Remote sensing; Teledetección; Forest; Bosque; Tropical zones; Zona tropical; Monitoring; Vigilancia; Vegetation; Vegetación
title_short Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
title_full Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
title_fullStr Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
title_full_unstemmed Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
title_sort Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing
author Sánchez Fuentes, Teiser
author_facet Sánchez Fuentes, Teiser
Gómez Fernández, Darwin
Fernandez Jibaja, Jorge Antonio
Oblitas Troyes, Jhon Franklin
Chuquibala Checan, Beimer
Tafur Culqui, Josué
Quichua Baldeon, Rosalia
Taboada Mitma, Víctor Hugo
Tineo Flores, Daniel
Goñas Goñas, Malluri
Atalaya Marin, Nilton
author_role author
author2 Gómez Fernández, Darwin
Fernandez Jibaja, Jorge Antonio
Oblitas Troyes, Jhon Franklin
Chuquibala Checan, Beimer
Tafur Culqui, Josué
Quichua Baldeon, Rosalia
Taboada Mitma, Víctor Hugo
Tineo Flores, Daniel
Goñas Goñas, Malluri
Atalaya Marin, Nilton
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Sánchez Fuentes, Teiser
Gómez Fernández, Darwin
Fernandez Jibaja, Jorge Antonio
Oblitas Troyes, Jhon Franklin
Chuquibala Checan, Beimer
Tafur Culqui, Josué
Quichua Baldeon, Rosalia
Taboada Mitma, Víctor Hugo
Tineo Flores, Daniel
Goñas Goñas, Malluri
Atalaya Marin, Nilton
dc.subject.none.fl_str_mv LiDAR
Multispectral Mapping
Mapeo multiespectral
Canopy
Dosel
Terra
topic LiDAR
Multispectral Mapping
Mapeo multiespectral
Canopy
Dosel
Terra
https://purl.org/pe-repo/ocde/ford#4.01.00
Agroforestry; Agroforestería; Remote sensing; Teledetección; Forest; Bosque; Tropical zones; Zona tropical; Monitoring; Vigilancia; Vegetation; Vegetación
dc.subject.ocde.none.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.01.00
dc.subject.agrovoc.none.fl_str_mv Agroforestry; Agroforestería; Remote sensing; Teledetección; Forest; Bosque; Tropical zones; Zona tropical; Monitoring; Vigilancia; Vegetation; Vegetación
description Monitoring agroforestry systems remains challenging due to canopy heterogeneity and the coexistence of species with contrasting dynamics. While field-based methods offer high accuracy, they are inefficient for rapid and multitemporal structural assessments. This study integrated LiDAR and multispectral data collected using a Matrice 350 RTK equipped with a Zenmuse L2 sensor and a RedEdge-P camera. Raw LiDAR data were processed in DJI Terra v4.1 and subsequently pre-processed and corrected in TerraSolid v23.011, whereas multispectral products were generated in Agisoft Metashape Professional v2.2.1. The derived metrics indicated greater growth in System A, driven by fast-growing species, whereas System B showed an overall reduction with slight increases in the upper percentiles. In addition, MSAVI and MTVI2 were sensitive to canopy structure, while GNDVI and NDRE responded to foliage content. The agreement analysis revealed a slight bias (0.09 m) toward height overestimation by LiDAR compared to the hypsometer, with no apparent proportional error. This approach provides a replicable framework for multitemporal monitoring of structural and physiological changes in tropical vegetation, with potential for regional scaling and application in sustainable forest system management.
publishDate 2026
dc.date.accessioned.none.fl_str_mv 2026-05-05T15:20:26Z
dc.date.available.none.fl_str_mv 2026-05-05T15:20:26Z
dc.date.issued.fl_str_mv 2026-03-11
dc.type.none.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.none.fl_str_mv Sánchez-Fuentes, T., Gómez-Fernández, D., Fernandez-Jibaja, J. A., Oblitas-Troyes, J. F., Chuquibala-Checan, B., Tafur-Culqui, J., Quichua-Baldeon, R., Taboada-Mitma, V. H., Tineo, D., Goñas, M., & Atalaya-Marin, N. (2026). Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing. Remote Sensing Applications: Society and Environment, 42, Article 101966. https://doi.org/10.1016/j.rsase.2026.101966
dc.identifier.issn.none.fl_str_mv 2352-9385
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12955/3125
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.rsase.2026.101966
identifier_str_mv Sánchez-Fuentes, T., Gómez-Fernández, D., Fernandez-Jibaja, J. A., Oblitas-Troyes, J. F., Chuquibala-Checan, B., Tafur-Culqui, J., Quichua-Baldeon, R., Taboada-Mitma, V. H., Tineo, D., Goñas, M., & Atalaya-Marin, N. (2026). Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing. Remote Sensing Applications: Society and Environment, 42, Article 101966. https://doi.org/10.1016/j.rsase.2026.101966
2352-9385
url http://hdl.handle.net/20.500.12955/3125
https://doi.org/10.1016/j.rsase.2026.101966
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv urn:issn:2352-9385
dc.relation.ispartofseries.none.fl_str_mv Remote Sensing Applications: Society and Environment
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
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eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier B.V.
dc.publisher.country.none.fl_str_mv NL
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Instituto Nacional de Innovación Agraria
reponame:INIA-Institucional
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instname_str Instituto Nacional de Innovación Agraria
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spelling Sánchez Fuentes, TeiserGómez Fernández, DarwinFernandez Jibaja, Jorge AntonioOblitas Troyes, Jhon FranklinChuquibala Checan, BeimerTafur Culqui, JosuéQuichua Baldeon, RosaliaTaboada Mitma, Víctor HugoTineo Flores, DanielGoñas Goñas, MalluriAtalaya Marin, Nilton2026-05-05T15:20:26Z2026-05-05T15:20:26Z2026-03-11Sánchez-Fuentes, T., Gómez-Fernández, D., Fernandez-Jibaja, J. A., Oblitas-Troyes, J. F., Chuquibala-Checan, B., Tafur-Culqui, J., Quichua-Baldeon, R., Taboada-Mitma, V. H., Tineo, D., Goñas, M., & Atalaya-Marin, N. (2026). Indirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensing. Remote Sensing Applications: Society and Environment, 42, Article 101966. https://doi.org/10.1016/j.rsase.2026.1019662352-9385http://hdl.handle.net/20.500.12955/3125https://doi.org/10.1016/j.rsase.2026.101966Monitoring agroforestry systems remains challenging due to canopy heterogeneity and the coexistence of species with contrasting dynamics. While field-based methods offer high accuracy, they are inefficient for rapid and multitemporal structural assessments. This study integrated LiDAR and multispectral data collected using a Matrice 350 RTK equipped with a Zenmuse L2 sensor and a RedEdge-P camera. Raw LiDAR data were processed in DJI Terra v4.1 and subsequently pre-processed and corrected in TerraSolid v23.011, whereas multispectral products were generated in Agisoft Metashape Professional v2.2.1. The derived metrics indicated greater growth in System A, driven by fast-growing species, whereas System B showed an overall reduction with slight increases in the upper percentiles. In addition, MSAVI and MTVI2 were sensitive to canopy structure, while GNDVI and NDRE responded to foliage content. The agreement analysis revealed a slight bias (0.09 m) toward height overestimation by LiDAR compared to the hypsometer, with no apparent proportional error. This approach provides a replicable framework for multitemporal monitoring of structural and physiological changes in tropical vegetation, with potential for regional scaling and application in sustainable forest system management.The authors thank the Instituto Nacional de Innovacion ´ Agraria (INIA) through the Investment Project with CUI N◦. 2472675 entitled: “Mejoramiento de los servicios de investigacion ´ y transferencia de tecnología agraria en la estacion ´ agraria experimental Banos ˜ del Inca en la localidad de Banos ˜ del Inca del distrito de Banos ˜ del Inca - provincia de Cajamarca - departamento de Cajamarca” which funded the execution of this researchapplication/pdfengElsevier B.V.NLurn:issn:2352-9385Remote Sensing Applications: Society and Environmentinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/Instituto Nacional de Innovación Agrariareponame:INIA-Institucionalinstname:Instituto Nacional de Innovación Agrariainstacron:INIARepositorio Institucional - INIALiDARMultispectral MappingMapeo multiespectralCanopyDoselTerrahttps://purl.org/pe-repo/ocde/ford#4.01.00Agroforestry; Agroforestería; Remote sensing; Teledetección; Forest; Bosque; Tropical zones; Zona tropical; Monitoring; Vigilancia; Vegetation; VegetaciónIndirect monitoring of heterogeneous tropical agroforestry systems using active and passive remote sensinginfo:eu-repo/semantics/articleLICENSElicense.txtlicense.txttext/plain; charset=utf-81792https://repositorio.inia.gob.pe/bitstreams/6696fa17-7bfe-4585-91bc-c21950c60b04/downloada1dff3722e05e29dac20fa1a97a12ccfMD51ORIGINALSánchez-Fuentes_et-al_2026_indirect_monitoring_heterogeneous_tropical_agroforestry.pdfSánchez-Fuentes_et-al_2026_indirect_monitoring_heterogeneous_tropical_agroforestry.pdfapplication/pdf32062100https://repositorio.inia.gob.pe/bitstreams/e766f910-c6fd-44d2-9768-6641023fee6d/download7e54bcbf31725f9917b1eeeed3f4b5ffMD52THUMBNAILSánchez-Fuentes_et-al_2026_indirect_monitoring_heterogeneous_tropical_agroforestry.jpgimage/jpeg173747https://repositorio.inia.gob.pe/bitstreams/e38ba682-e277-464f-819b-d2c2dc44f623/download112ba220115b6aa4bf3a9e56a51c613eMD5320.500.12955/3125oai:repositorio.inia.gob.pe:20.500.12955/31252026-05-08 09:54:42.402https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessopen.accesshttps://repositorio.inia.gob.peRepositorio Institucional INIArepositorio@inia.gob.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