Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest

Descripción del Articulo

Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a tota...

Descripción completa

Detalles Bibliográficos
Autores: Paul S., Zhang A., Ludeña Y., Villena G.K., Yu F., Sherman D.H., Gutiérrez-Correa M.
Formato: artículo
Fecha de Publicación:2017
Institución:Consejo Nacional de Ciencia Tecnología e Innovación
Repositorio:CONCYTEC-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.concytec.gob.pe:20.500.12390/663
Enlace del recurso:https://hdl.handle.net/20.500.12390/663
https://doi.org/10.1016/j.jbiotec.2017.04.010
Nivel de acceso:acceso abierto
Materia:Soils
Aspergillus
Genetic engineering
Scaffolds (biology)
Amazon rain forest
Aspergillus fumigatus
CAZymes
Lignocellulolytic enzymes
https://purl.org/pe-repo/ocde/ford#3.04.00
id CONC_9afd99dfee712458752a7955f1ae5727
oai_identifier_str oai:repositorio.concytec.gob.pe:20.500.12390/663
network_acronym_str CONC
network_name_str CONCYTEC-Institucional
repository_id_str 4689
dc.title.none.fl_str_mv Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
title Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
spellingShingle Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
Paul S.
Soils
Aspergillus
Genetic engineering
Scaffolds (biology)
Amazon rain forest
Aspergillus fumigatus
CAZymes
Lignocellulolytic enzymes
https://purl.org/pe-repo/ocde/ford#3.04.00
title_short Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
title_full Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
title_fullStr Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
title_full_unstemmed Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
title_sort Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
author Paul S.
author_facet Paul S.
Zhang A.
Ludeña Y.
Villena G.K.
Yu F.
Sherman D.H.
Gutiérrez-Correa M.
author_role author
author2 Zhang A.
Ludeña Y.
Villena G.K.
Yu F.
Sherman D.H.
Gutiérrez-Correa M.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Paul S.
Zhang A.
Ludeña Y.
Villena G.K.
Yu F.
Sherman D.H.
Gutiérrez-Correa M.
dc.subject.none.fl_str_mv Soils
topic Soils
Aspergillus
Genetic engineering
Scaffolds (biology)
Amazon rain forest
Aspergillus fumigatus
CAZymes
Lignocellulolytic enzymes
https://purl.org/pe-repo/ocde/ford#3.04.00
dc.subject.es_PE.fl_str_mv Aspergillus
Genetic engineering
Scaffolds (biology)
Amazon rain forest
Aspergillus fumigatus
CAZymes
Lignocellulolytic enzymes
dc.subject.ocde.none.fl_str_mv https://purl.org/pe-repo/ocde/ford#3.04.00
description Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a total of 8660 protein-coding genes. Of which, 6156 are with known function; it codes for 607 putative CAZymes families potentially involved in carbohydrate metabolism. Several important cellulose degrading genes, such as endoglucanase A, endoglucanase B, endoglucanase D and beta-glucosidase, are also identified. The genome of A. fumigatus strain LMB-35Aa represents the first whole sequenced genome of non-clinical, high cellulase producing A. fumigatus strain isolated from forest soil.
publishDate 2017
dc.date.accessioned.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.available.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.issued.fl_str_mv 2017
dc.type.none.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12390/663
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.jbiotec.2017.04.010
dc.identifier.scopus.none.fl_str_mv 2-s2.0-85018475484
url https://hdl.handle.net/20.500.12390/663
https://doi.org/10.1016/j.jbiotec.2017.04.010
identifier_str_mv 2-s2.0-85018475484
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv Journal of Biotechnology
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.none.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:CONCYTEC-Institucional
instname:Consejo Nacional de Ciencia Tecnología e Innovación
instacron:CONCYTEC
instname_str Consejo Nacional de Ciencia Tecnología e Innovación
instacron_str CONCYTEC
institution CONCYTEC
reponame_str CONCYTEC-Institucional
collection CONCYTEC-Institucional
repository.name.fl_str_mv Repositorio Institucional CONCYTEC
repository.mail.fl_str_mv repositorio@concytec.gob.pe
_version_ 1844883038624808960
spelling Publicationrp00140400rp01490600rp01495600rp01493600rp01491600rp01492600rp01494600Paul S.Zhang A.Ludeña Y.Villena G.K.Yu F.Sherman D.H.Gutiérrez-Correa M.2024-05-30T23:13:38Z2024-05-30T23:13:38Z2017https://hdl.handle.net/20.500.12390/663https://doi.org/10.1016/j.jbiotec.2017.04.0102-s2.0-85018475484Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a total of 8660 protein-coding genes. Of which, 6156 are with known function; it codes for 607 putative CAZymes families potentially involved in carbohydrate metabolism. Several important cellulose degrading genes, such as endoglucanase A, endoglucanase B, endoglucanase D and beta-glucosidase, are also identified. The genome of A. fumigatus strain LMB-35Aa represents the first whole sequenced genome of non-clinical, high cellulase producing A. fumigatus strain isolated from forest soil.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengElsevierJournal of Biotechnologyinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/SoilsAspergillus-1Genetic engineering-1Scaffolds (biology)-1Amazon rain forest-1Aspergillus fumigatus-1CAZymes-1Lignocellulolytic enzymes-1https://purl.org/pe-repo/ocde/ford#3.04.00-1Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforestinfo:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTEC20.500.12390/663oai:repositorio.concytec.gob.pe:20.500.12390/6632024-05-30 15:58:27.655https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_14cbinfo:eu-repo/semantics/closedAccessmetadata only accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="dd9e8aba-46fa-45c4-9499-c20811aeedd4"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest</Title> <PublishedIn> <Publication> <Title>Journal of Biotechnology</Title> </Publication> </PublishedIn> <PublicationDate>2017</PublicationDate> <DOI>https://doi.org/10.1016/j.jbiotec.2017.04.010</DOI> <SCP-Number>2-s2.0-85018475484</SCP-Number> <Authors> <Author> <DisplayName>Paul S.</DisplayName> <Person id="rp00140" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Zhang A.</DisplayName> <Person id="rp01490" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Ludeña Y.</DisplayName> <Person id="rp01495" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Villena G.K.</DisplayName> <Person id="rp01493" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Yu F.</DisplayName> <Person id="rp01491" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Sherman D.H.</DisplayName> <Person id="rp01492" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Gutiérrez-Correa M.</DisplayName> <Person id="rp01494" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>Elsevier</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>https://creativecommons.org/licenses/by-nc-nd/4.0/</License> <Keyword>Soils</Keyword> <Keyword>Aspergillus</Keyword> <Keyword>Genetic engineering</Keyword> <Keyword>Scaffolds (biology)</Keyword> <Keyword>Amazon rain forest</Keyword> <Keyword>Aspergillus fumigatus</Keyword> <Keyword>CAZymes</Keyword> <Keyword>Lignocellulolytic enzymes</Keyword> <Abstract>Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a total of 8660 protein-coding genes. Of which, 6156 are with known function; it codes for 607 putative CAZymes families potentially involved in carbohydrate metabolism. Several important cellulose degrading genes, such as endoglucanase A, endoglucanase B, endoglucanase D and beta-glucosidase, are also identified. The genome of A. fumigatus strain LMB-35Aa represents the first whole sequenced genome of non-clinical, high cellulase producing A. fumigatus strain isolated from forest soil.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1
score 13.377223
Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).