Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest
Descripción del Articulo
Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a tota...
| Autores: | , , , , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2017 |
| Institución: | Consejo Nacional de Ciencia Tecnología e Innovación |
| Repositorio: | CONCYTEC-Institucional |
| Lenguaje: | inglés |
| OAI Identifier: | oai:repositorio.concytec.gob.pe:20.500.12390/663 |
| Enlace del recurso: | https://hdl.handle.net/20.500.12390/663 https://doi.org/10.1016/j.jbiotec.2017.04.010 |
| Nivel de acceso: | acceso abierto |
| Materia: | Soils Aspergillus Genetic engineering Scaffolds (biology) Amazon rain forest Aspergillus fumigatus CAZymes Lignocellulolytic enzymes https://purl.org/pe-repo/ocde/ford#3.04.00 |
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4689 |
| dc.title.none.fl_str_mv |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest |
| title |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest |
| spellingShingle |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest Paul S. Soils Aspergillus Genetic engineering Scaffolds (biology) Amazon rain forest Aspergillus fumigatus CAZymes Lignocellulolytic enzymes https://purl.org/pe-repo/ocde/ford#3.04.00 |
| title_short |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest |
| title_full |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest |
| title_fullStr |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest |
| title_full_unstemmed |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest |
| title_sort |
Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest |
| author |
Paul S. |
| author_facet |
Paul S. Zhang A. Ludeña Y. Villena G.K. Yu F. Sherman D.H. Gutiérrez-Correa M. |
| author_role |
author |
| author2 |
Zhang A. Ludeña Y. Villena G.K. Yu F. Sherman D.H. Gutiérrez-Correa M. |
| author2_role |
author author author author author author |
| dc.contributor.author.fl_str_mv |
Paul S. Zhang A. Ludeña Y. Villena G.K. Yu F. Sherman D.H. Gutiérrez-Correa M. |
| dc.subject.none.fl_str_mv |
Soils |
| topic |
Soils Aspergillus Genetic engineering Scaffolds (biology) Amazon rain forest Aspergillus fumigatus CAZymes Lignocellulolytic enzymes https://purl.org/pe-repo/ocde/ford#3.04.00 |
| dc.subject.es_PE.fl_str_mv |
Aspergillus Genetic engineering Scaffolds (biology) Amazon rain forest Aspergillus fumigatus CAZymes Lignocellulolytic enzymes |
| dc.subject.ocde.none.fl_str_mv |
https://purl.org/pe-repo/ocde/ford#3.04.00 |
| description |
Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a total of 8660 protein-coding genes. Of which, 6156 are with known function; it codes for 607 putative CAZymes families potentially involved in carbohydrate metabolism. Several important cellulose degrading genes, such as endoglucanase A, endoglucanase B, endoglucanase D and beta-glucosidase, are also identified. The genome of A. fumigatus strain LMB-35Aa represents the first whole sequenced genome of non-clinical, high cellulase producing A. fumigatus strain isolated from forest soil. |
| publishDate |
2017 |
| dc.date.accessioned.none.fl_str_mv |
2024-05-30T23:13:38Z |
| dc.date.available.none.fl_str_mv |
2024-05-30T23:13:38Z |
| dc.date.issued.fl_str_mv |
2017 |
| dc.type.none.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12390/663 |
| dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1016/j.jbiotec.2017.04.010 |
| dc.identifier.scopus.none.fl_str_mv |
2-s2.0-85018475484 |
| url |
https://hdl.handle.net/20.500.12390/663 https://doi.org/10.1016/j.jbiotec.2017.04.010 |
| identifier_str_mv |
2-s2.0-85018475484 |
| dc.language.iso.none.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartof.none.fl_str_mv |
Journal of Biotechnology |
| dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess |
| dc.rights.uri.none.fl_str_mv |
https://creativecommons.org/licenses/by-nc-nd/4.0/ |
| eu_rights_str_mv |
openAccess |
| rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-nd/4.0/ |
| dc.publisher.none.fl_str_mv |
Elsevier |
| publisher.none.fl_str_mv |
Elsevier |
| dc.source.none.fl_str_mv |
reponame:CONCYTEC-Institucional instname:Consejo Nacional de Ciencia Tecnología e Innovación instacron:CONCYTEC |
| instname_str |
Consejo Nacional de Ciencia Tecnología e Innovación |
| instacron_str |
CONCYTEC |
| institution |
CONCYTEC |
| reponame_str |
CONCYTEC-Institucional |
| collection |
CONCYTEC-Institucional |
| repository.name.fl_str_mv |
Repositorio Institucional CONCYTEC |
| repository.mail.fl_str_mv |
repositorio@concytec.gob.pe |
| _version_ |
1844883038624808960 |
| spelling |
Publicationrp00140400rp01490600rp01495600rp01493600rp01491600rp01492600rp01494600Paul S.Zhang A.Ludeña Y.Villena G.K.Yu F.Sherman D.H.Gutiérrez-Correa M.2024-05-30T23:13:38Z2024-05-30T23:13:38Z2017https://hdl.handle.net/20.500.12390/663https://doi.org/10.1016/j.jbiotec.2017.04.0102-s2.0-85018475484Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a total of 8660 protein-coding genes. Of which, 6156 are with known function; it codes for 607 putative CAZymes families potentially involved in carbohydrate metabolism. Several important cellulose degrading genes, such as endoglucanase A, endoglucanase B, endoglucanase D and beta-glucosidase, are also identified. The genome of A. fumigatus strain LMB-35Aa represents the first whole sequenced genome of non-clinical, high cellulase producing A. fumigatus strain isolated from forest soil.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengElsevierJournal of Biotechnologyinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/SoilsAspergillus-1Genetic engineering-1Scaffolds (biology)-1Amazon rain forest-1Aspergillus fumigatus-1CAZymes-1Lignocellulolytic enzymes-1https://purl.org/pe-repo/ocde/ford#3.04.00-1Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforestinfo:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTEC20.500.12390/663oai:repositorio.concytec.gob.pe:20.500.12390/6632024-05-30 15:58:27.655https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_14cbinfo:eu-repo/semantics/closedAccessmetadata only accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="dd9e8aba-46fa-45c4-9499-c20811aeedd4"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest</Title> <PublishedIn> <Publication> <Title>Journal of Biotechnology</Title> </Publication> </PublishedIn> <PublicationDate>2017</PublicationDate> <DOI>https://doi.org/10.1016/j.jbiotec.2017.04.010</DOI> <SCP-Number>2-s2.0-85018475484</SCP-Number> <Authors> <Author> <DisplayName>Paul S.</DisplayName> <Person id="rp00140" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Zhang A.</DisplayName> <Person id="rp01490" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Ludeña Y.</DisplayName> <Person id="rp01495" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Villena G.K.</DisplayName> <Person id="rp01493" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Yu F.</DisplayName> <Person id="rp01491" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Sherman D.H.</DisplayName> <Person id="rp01492" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Gutiérrez-Correa M.</DisplayName> <Person id="rp01494" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>Elsevier</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>https://creativecommons.org/licenses/by-nc-nd/4.0/</License> <Keyword>Soils</Keyword> <Keyword>Aspergillus</Keyword> <Keyword>Genetic engineering</Keyword> <Keyword>Scaffolds (biology)</Keyword> <Keyword>Amazon rain forest</Keyword> <Keyword>Aspergillus fumigatus</Keyword> <Keyword>CAZymes</Keyword> <Keyword>Lignocellulolytic enzymes</Keyword> <Abstract>Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5 mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a total of 8660 protein-coding genes. Of which, 6156 are with known function; it codes for 607 putative CAZymes families potentially involved in carbohydrate metabolism. Several important cellulose degrading genes, such as endoglucanase A, endoglucanase B, endoglucanase D and beta-glucosidase, are also identified. The genome of A. fumigatus strain LMB-35Aa represents the first whole sequenced genome of non-clinical, high cellulase producing A. fumigatus strain isolated from forest soil.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1 |
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13.377223 |
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La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).