Phaseolus vulgaris is originally from the American continent. It is renowned as one of the preferred legume choice in the Peruvian market, due to its high content of nutrients. The Peruvian coast valleys are key-production areas for local varieties of the common bean crops. Soil-borne plant pathogens, however, favored by soil and environmental conditions, may reduce crop production. The aim of this study was to conduct a bio prospection of the antagonistic native bacteria of the north, south and central part of the coastal areas related to the common bean. A collection of 26 strains isolated from the rhizosphere of common bean plants showed high potential to control the growth of Sclerotinia, Fusarium and Rhizoctonia due to the production of both volatile and non-volatile organic compounds. Most of the strains were able to suppress fungal growth due to the presence of non-volatile organi...

A collection of 16 bacterial strains isolated from root nodules of Lima bean (Phaseolus lunatus L.) in the Supe valley of Peru were characterised using phenotypic and molecular methods. The isolates were clustered into fastgrowing, alkalinising and extra-alkalinising slow-growing isolates with marked morphological differences, according to the rate of growth and alkalinisation of yeast extract mannitol (YEM) medium. Fast-growing isolates were salt tolerant and sensitive to 40 °C, while alkalinising slow-growing isolates behaved oppositely. Extra-alkalinising slow-growing isolates were sensitive to 8 °C and 40 °C and tolerated 1 % NaCl. Fastgrowing isolates also showed higher indole-3-acetic acid (IAA) production and tri-calcium phosphate solubilisation than the alkalinising slow-growing isolates. Half of the isolates were able to nodulate Phaseolus vulgaris and Vigna unguiculata. Indi...

The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N50 and L50 values of 293 kbp and 9, respectively. The genome contained 6,312 coding sequence (CDS) genes and 52 RNA genes (49 tRNAs and 3 rRNAs). © 2018 Ormeño-Orrillo et al.

The complete symbiosis island (SI) of Bradyrhizobium paxllaeri LMTR 21T, a mutualistic symbiont of the legume Phaseolus lunatus, was identified and analyzed. The SI was 646 kb in size, had lower G+C content than the genome average, and encoded not only nodulation and nitrogen fixation functions but also those for hydrogen uptake, vitamin and phytohormone biosynthesis, molybdenum transport, nonribosomal peptide synthesis, and type III secretion. Additionally, two divergent nodA genes were encoded in the SI. © 2019, Sociedade Brasileira de Microbiologia.

The Peruvian Andean Plateau, one of the main production areas of native varieties of Chenopodium quinoa, is exposed to abrupt decreases in environmental temperature, affecting crop production. Plant-growth-promoting rhizobacteria that tolerate low temperatures could be used as organic biofertilizers in this region. We aimed to bioprospect the native psychrotolerant bacteria of the quinoa rhizosphere in this region that show plant-growth-promoting traits. Fifty-one strains belonging to the quinoa rhizosphere were characterised; 73% of the total could grow at low temperatures (4, 6, and 15 °C), whose genetic diversity based on DNA amplification of interspersed repetitive elements (BOX) showed 12 different profiles. According to the 16S rRNA sequence, bacterial species belonging to the classes Beta-and Gammaproteobacteria were identified. Only three (6%) isolates identified as nonpathogeni...

Tara (Caesalpinia spinosa) is an emblematic legume tree of Peruvian dry forests and is a multi-purpose tree for tannins and gum, in particular. Despite its importance, the microbiological aspects associated with tara are not currently considered in forest management, and its nodulation status remains contentious. This study sought to confirm or deny C. spinosa’s nodulation status and, using P. sativum as a trap plant, to investigate the effects of C. spinosa on rhizospheric rhizobial communities. The study revealed a lack of tara nitrogenase activity and that C. spinosa is a non-nodulating species. Soil samples were collected from a tara plantation to investigate their effect on tara and pea growth, in a tara planting row (R), between 2 rows (IR), and outside the plantation (OP). For the total biomass growth parameter, soil R significantly promoted tara and pea growth. For root length ...

The complete genome sequence of Bradyrhizobium icense LMTR 13T, a root nodule bacterium isolated from the legume Phaseolus lunatus, is reported here. The genome consists of a circular 8,322,773-bp chromosome which codes for a large and novel symbiotic island as well as genes putatively involved in soil and root colonization. © 2018 Ormeño-Orrillo et al.

Human life became largely dependent on agricultural products after distinct crop-domestication events occurred around 10,000 years ago in different geographical sites. Domestication selected suitable plants for human agricultural practices with unexpected consequences on plant microbiota, which has notable effects on plant growth and health. Among other traits, domestication has changed root architecture, exudation, or defense responses that could have modified plant microbiota. Here we present the comparison of reported data on the microbiota from widely consumed cereals and legumes and their ancestors showing that different bacteria were found in domesticated and wild plant microbiomes in some cases. Considering the large variability in plant microbiota, adequate sampling efforts and function-based approaches are needed to further support differences between the microbiota from wild an...