Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru

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The aim of this study was the genotyping of Ornithobacterium rhinotracheale. For this, 36 strains were identified by molecular testing and genotyping was performed by Multilocus Sequence Typing (MLST). The tests identified the type sequences: N.T.1, N.T2 and N.T3, different from the NCBI database an...

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Detalles Bibliográficos
Autores: Cotaquispe Nalvarte, Rony Yunior, Manchego Sayan, Alberto, Rodríguez Bailon, Jorge, Koga Yanagui, Ysabel
Formato: artículo
Fecha de Publicación:2021
Institución:Universidad Nacional Mayor de San Marcos
Repositorio:Revistas - Universidad Nacional Mayor de San Marcos
Lenguaje:español
OAI Identifier:oai:ojs.csi.unmsm:article/20932
Enlace del recurso:https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/20932
Nivel de acceso:acceso abierto
Materia:genotype
type sequence
Multilocus Sequence Typing
genotipo
secuencia tipo
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spelling Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in PeruCaracterización genotípica por MLST de Ornithobacterium rhinotracheale procedentes de aves de corral en el PerúCotaquispe Nalvarte, Rony YuniorManchego Sayan, AlbertoRodríguez Bailon, JorgeKoga Yanagui, YsabelCotaquispe Nalvarte, Rony YuniorManchego Sayan, AlbertoRodríguez Bailon, JorgeKoga Yanagui, Ysabelgenotypetype sequenceMultilocus Sequence Typinggenotiposecuencia tipoMultilocus Sequence TypingThe aim of this study was the genotyping of Ornithobacterium rhinotracheale. For this, 36 strains were identified by molecular testing and genotyping was performed by Multilocus Sequence Typing (MLST). The tests identified the type sequences: N.T.1, N.T2 and N.T3, different from the NCBI database and 19 different alleles with 229 polymorphic sites. In addition, 32 strains belonged to the common ST1 genotype. The findings identified at least four genotypes in chickens from various regions of Peru.El objetivo del presente estudio fue la genotipificación de Ornithobacterium rhinotracheale. Se identificaron 36 cepas por pruebas moleculares y se realizó la genotipificación por Multilocus Sequence Typing (MLST). Los ensayos identificaron las secuencias tipo: N.T.1, N.T2 y N.T3, diferentes a la base de datos del NCBI y 19 alelos distintos con 229 sitios polimórficos. Además, 32 cepas pertenecen al genotipo común ST1. Los hallazgos identificaron al menos cuatro genotipos en pollos de varias regiones del Perú.Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria2021-08-24info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/2093210.15381/rivep.v32i4.20932Revista de Investigaciones Veterinarias del Perú; Vol. 32 Núm. 4 (2021); e20932Revista de Investigaciones Veterinarias del Perú; Vol. 32 No. 4 (2021); e209321682-34191609-9117reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/20932/17102Derechos de autor 2021 Rony Yunior Cotaquispe Nalvarte, Alberto Manchego Sayan, Jorge Rodríguez Bailon, Ysabel Koga Yanaguihttp://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessoai:ojs.csi.unmsm:article/209322021-08-26T00:26:17Z
dc.title.none.fl_str_mv Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
Caracterización genotípica por MLST de Ornithobacterium rhinotracheale procedentes de aves de corral en el Perú
title Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
spellingShingle Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
Cotaquispe Nalvarte, Rony Yunior
genotype
type sequence
Multilocus Sequence Typing
genotipo
secuencia tipo
Multilocus Sequence Typing
title_short Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
title_full Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
title_fullStr Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
title_full_unstemmed Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
title_sort Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
dc.creator.none.fl_str_mv Cotaquispe Nalvarte, Rony Yunior
Manchego Sayan, Alberto
Rodríguez Bailon, Jorge
Koga Yanagui, Ysabel
Cotaquispe Nalvarte, Rony Yunior
Manchego Sayan, Alberto
Rodríguez Bailon, Jorge
Koga Yanagui, Ysabel
author Cotaquispe Nalvarte, Rony Yunior
author_facet Cotaquispe Nalvarte, Rony Yunior
Manchego Sayan, Alberto
Rodríguez Bailon, Jorge
Koga Yanagui, Ysabel
author_role author
author2 Manchego Sayan, Alberto
Rodríguez Bailon, Jorge
Koga Yanagui, Ysabel
author2_role author
author
author
dc.subject.none.fl_str_mv genotype
type sequence
Multilocus Sequence Typing
genotipo
secuencia tipo
Multilocus Sequence Typing
topic genotype
type sequence
Multilocus Sequence Typing
genotipo
secuencia tipo
Multilocus Sequence Typing
description The aim of this study was the genotyping of Ornithobacterium rhinotracheale. For this, 36 strains were identified by molecular testing and genotyping was performed by Multilocus Sequence Typing (MLST). The tests identified the type sequences: N.T.1, N.T2 and N.T3, different from the NCBI database and 19 different alleles with 229 polymorphic sites. In addition, 32 strains belonged to the common ST1 genotype. The findings identified at least four genotypes in chickens from various regions of Peru.
publishDate 2021
dc.date.none.fl_str_mv 2021-08-24
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/20932
10.15381/rivep.v32i4.20932
url https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/20932
identifier_str_mv 10.15381/rivep.v32i4.20932
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/20932/17102
dc.rights.none.fl_str_mv http://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
dc.source.none.fl_str_mv Revista de Investigaciones Veterinarias del Perú; Vol. 32 Núm. 4 (2021); e20932
Revista de Investigaciones Veterinarias del Perú; Vol. 32 No. 4 (2021); e20932
1682-3419
1609-9117
reponame:Revistas - Universidad Nacional Mayor de San Marcos
instname:Universidad Nacional Mayor de San Marcos
instacron:UNMSM
instname_str Universidad Nacional Mayor de San Marcos
instacron_str UNMSM
institution UNMSM
reponame_str Revistas - Universidad Nacional Mayor de San Marcos
collection Revistas - Universidad Nacional Mayor de San Marcos
repository.name.fl_str_mv
repository.mail.fl_str_mv
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score 13.945474
Genotypic characterization by MLST of Ornithobacterium rhinotracheale from poultry in Peru
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