Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination

Descripción del Articulo

Many species of chili peppers have overlapping morphological characters and delimitation by visual descriptors in many cases fails to differentiate one species from another. In Peru, there are 413 accessions of native chili pepper and 296 accessions of rocotos conserved in the Germplasm Collections...

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Detalles Bibliográficos
Autores: Espichán, Fabio, Rojas, Rosario, Quispe Jacobo, Fredy Enrique, Cabanac, Guillaume, Marti, Guillaume
Formato: artículo
Fecha de Publicación:2022
Institución:Instituto Nacional de Innovación Agraria
Repositorio:INIA-Institucional
Lenguaje:inglés
OAI Identifier:oai:null:20.500.12955/1813
Enlace del recurso:https://hdl.handle.net/20.500.12955/1813
https://doi.org/10.1016/j.foodchem.2022.132704
Nivel de acceso:acceso abierto
Materia:Metabolomic
Capsicum
Peruvian native chili peppers
OPLS-DA
SUS-plot
Biomarkers
https://purl.org/pe-repo/ocde/ford#4.04.00
Guindilla
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dc.title.es_PE.fl_str_mv Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
title Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
spellingShingle Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
Espichán, Fabio
Metabolomic
Capsicum
Peruvian native chili peppers
OPLS-DA
SUS-plot
Biomarkers
https://purl.org/pe-repo/ocde/ford#4.04.00
Guindilla
title_short Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
title_full Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
title_fullStr Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
title_full_unstemmed Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
title_sort Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination
author Espichán, Fabio
author_facet Espichán, Fabio
Rojas, Rosario
Quispe Jacobo, Fredy Enrique
Cabanac, Guillaume
Marti, Guillaume
author_role author
author2 Rojas, Rosario
Quispe Jacobo, Fredy Enrique
Cabanac, Guillaume
Marti, Guillaume
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Espichán, Fabio
Rojas, Rosario
Quispe Jacobo, Fredy Enrique
Cabanac, Guillaume
Marti, Guillaume
dc.subject.es_PE.fl_str_mv Metabolomic
Capsicum
Peruvian native chili peppers
topic Metabolomic
Capsicum
Peruvian native chili peppers
OPLS-DA
SUS-plot
Biomarkers
https://purl.org/pe-repo/ocde/ford#4.04.00
Guindilla
dc.subject.en.fl_str_mv OPLS-DA
SUS-plot
Biomarkers
dc.subject.ocde.es_PE.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.04.00
dc.subject.agrovoc.es_PE.fl_str_mv Guindilla
description Many species of chili peppers have overlapping morphological characters and delimitation by visual descriptors in many cases fails to differentiate one species from another. In Peru, there are 413 accessions of native chili pepper and 296 accessions of rocotos conserved in the Germplasm Collections of the National Institute of Agrarian Innovation (INIA), of which five accessions (three species from three locations) were selected for the present metabolomic study. The Discrimination of the three species of native chili peppers and identification of biomarkers was performed using untargeted metabolomic approach based on profiling by UHPLC-HRMS and multivariate data analysis. The samples of fresh chili peppers (whole fruit) from Chincha area were used to construct an OPLS-DA model. To validate the biomarkers (identified 15 biomarkers, mainly flavonoids), an external validation set of the OPLS-DA model was constructed using Chiclayo and Huaral collection datasets. Consequently, the OPLS-DA based on Chincha samples model has a high predictive capacity demonstrating that the biomarkers have a high probability of continuity in any culture space, being successful in discriminating the species by untargeted metabolomics.
publishDate 2022
dc.date.accessioned.none.fl_str_mv 2022-08-04T21:51:09Z
dc.date.available.none.fl_str_mv 2022-08-04T21:51:09Z
dc.date.issued.fl_str_mv 2022-03-17
dc.type.es_PE.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.es_PE.fl_str_mv Fabio Espichán, Rosario Rojas, Fredy Quispe, Guillaume Cabanac, Guillaume Marti, Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination, Food Chemistry, Volume 386, 2022, 132704, ISSN 0308-8146. doi: 10.1016/j.foodchem.2022.132704.
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12955/1813
dc.identifier.journal.es_PE.fl_str_mv Food Chemistry
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.foodchem.2022.132704
identifier_str_mv Fabio Espichán, Rosario Rojas, Fredy Quispe, Guillaume Cabanac, Guillaume Marti, Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination, Food Chemistry, Volume 386, 2022, 132704, ISSN 0308-8146. doi: 10.1016/j.foodchem.2022.132704.
Food Chemistry
url https://hdl.handle.net/20.500.12955/1813
https://doi.org/10.1016/j.foodchem.2022.132704
dc.language.iso.none.fl_str_mv eng
language eng
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dc.format.none.fl_str_mv application/pdf
dc.coverage.spatial.es_PE.fl_str_mv Perú
dc.publisher.none.fl_str_mv Elsevier
dc.publisher.country.es_PE.fl_str_mv Suiza
publisher.none.fl_str_mv Elsevier
dc.source.es_PE.fl_str_mv Instituto Nacional de Innovación Agraria
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spelling Espichán, FabioRojas, RosarioQuispe Jacobo, Fredy EnriqueCabanac, GuillaumeMarti, GuillaumePerú2022-08-04T21:51:09Z2022-08-04T21:51:09Z2022-03-17Fabio Espichán, Rosario Rojas, Fredy Quispe, Guillaume Cabanac, Guillaume Marti, Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination, Food Chemistry, Volume 386, 2022, 132704, ISSN 0308-8146. doi: 10.1016/j.foodchem.2022.132704.https://hdl.handle.net/20.500.12955/1813Food Chemistryhttps://doi.org/10.1016/j.foodchem.2022.132704Many species of chili peppers have overlapping morphological characters and delimitation by visual descriptors in many cases fails to differentiate one species from another. In Peru, there are 413 accessions of native chili pepper and 296 accessions of rocotos conserved in the Germplasm Collections of the National Institute of Agrarian Innovation (INIA), of which five accessions (three species from three locations) were selected for the present metabolomic study. The Discrimination of the three species of native chili peppers and identification of biomarkers was performed using untargeted metabolomic approach based on profiling by UHPLC-HRMS and multivariate data analysis. The samples of fresh chili peppers (whole fruit) from Chincha area were used to construct an OPLS-DA model. To validate the biomarkers (identified 15 biomarkers, mainly flavonoids), an external validation set of the OPLS-DA model was constructed using Chiclayo and Huaral collection datasets. Consequently, the OPLS-DA based on Chincha samples model has a high predictive capacity demonstrating that the biomarkers have a high probability of continuity in any culture space, being successful in discriminating the species by untargeted metabolomics.Abstract. 1. Introduction. 2. Material and methods. 3. Results. 4. 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