Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize

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Fusarium verticillioides represents a major phytopathogenic threat to maize crops worldwide. In this study, we present genomic sequence data of a phytopathogen isolated from a maize stem that shows obvious signs of vascular rot. Using rigorous microbiological identification techniques, we correlated...

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Detalles Bibliográficos
Autores: Estrada Cañari, Richard, Aragón, Liliana, Pérez Porras, Wendy E., Romero Avila, Yolanda, Martínez Vidal, Gabriel, García, Karina, Cruz Luis, Juancarlos, Arbizu Berrocal, Carlos I.
Formato: artículo
Fecha de Publicación:2024
Institución:Instituto Nacional de Innovación Agraria
Repositorio:INIA-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.inia.gob.pe:20.500.12955/2601
Enlace del recurso:https://hdl.handle.net/20.500.12955/2601
https://doi.org/10.1016/j.dib.2024.110951
Nivel de acceso:acceso abierto
Materia:Genome sequencing
Vascular rot
SSR data mining
https://purl.org/pe-repo/ocde/ford#4.01.06
Genomes
Genoma
Plant diseases
Enfermedades de las plantas
Data mining
Minería de datos
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dc.title.es_PE.fl_str_mv Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
title Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
spellingShingle Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
Estrada Cañari, Richard
Genome sequencing
Vascular rot
SSR data mining
https://purl.org/pe-repo/ocde/ford#4.01.06
Genomes
Genoma
Plant diseases
Enfermedades de las plantas
Data mining
Minería de datos
title_short Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
title_full Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
title_fullStr Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
title_full_unstemmed Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
title_sort Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize
author Estrada Cañari, Richard
author_facet Estrada Cañari, Richard
Aragón, Liliana
Pérez Porras, Wendy E.
Romero Avila, Yolanda
Martínez Vidal, Gabriel
García, Karina
Cruz Luis, Juancarlos
Arbizu Berrocal, Carlos I.
author_role author
author2 Aragón, Liliana
Pérez Porras, Wendy E.
Romero Avila, Yolanda
Martínez Vidal, Gabriel
García, Karina
Cruz Luis, Juancarlos
Arbizu Berrocal, Carlos I.
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Estrada Cañari, Richard
Aragón, Liliana
Pérez Porras, Wendy E.
Romero Avila, Yolanda
Martínez Vidal, Gabriel
García, Karina
Cruz Luis, Juancarlos
Arbizu Berrocal, Carlos I.
dc.subject.es_PE.fl_str_mv Genome sequencing
Vascular rot
SSR data mining
topic Genome sequencing
Vascular rot
SSR data mining
https://purl.org/pe-repo/ocde/ford#4.01.06
Genomes
Genoma
Plant diseases
Enfermedades de las plantas
Data mining
Minería de datos
dc.subject.ocde.es_PE.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.01.06
dc.subject.agrovoc.es_PE.fl_str_mv Genomes
Genoma
Plant diseases
Enfermedades de las plantas
Data mining
Minería de datos
description Fusarium verticillioides represents a major phytopathogenic threat to maize crops worldwide. In this study, we present genomic sequence data of a phytopathogen isolated from a maize stem that shows obvious signs of vascular rot. Using rigorous microbiological identification techniques, we correlated the disease symptoms observed in an affected maize region with the presence of the pathogen. Subsequently, the pathogen was cultured in a suitable fungal growth medium and extensive morphological characterization was performed. In addition, a pathogenicity test was carried out in a DCA model with three treatments and seven repetitions. De novo assembly from Illumina Novaseq 60 0 0 sequencing yielded 456 contigs, which together constitute a 42.8 Mb genome assembly with a GC % content of 48.26. Subsequent comparative analyses were performed with other Fusarium genomes available in the NCBI database.
publishDate 2024
dc.date.accessioned.none.fl_str_mv 2024-11-04T04:24:01Z
dc.date.available.none.fl_str_mv 2024-11-04T04:24:01Z
dc.date.issued.fl_str_mv 2024-09-23
dc.type.es_PE.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.es_PE.fl_str_mv Estrada-Cañari, R.; Aragón, L.; Pérez-Porras, W.E.; Romero-Avila, R.; Martínez-Vidal, G.; García, K.; Cruz-Luis, J.; & Arbizu-Berrocal, C.I. (2024). Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize. Data in brief, 57(2024), 110951. doi: 10.1016/j.dib.2024.110951
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dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.dib.2024.110951
identifier_str_mv Estrada-Cañari, R.; Aragón, L.; Pérez-Porras, W.E.; Romero-Avila, R.; Martínez-Vidal, G.; García, K.; Cruz-Luis, J.; & Arbizu-Berrocal, C.I. (2024). Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize. Data in brief, 57(2024), 110951. doi: 10.1016/j.dib.2024.110951
2352-3409
url https://hdl.handle.net/20.500.12955/2601
https://doi.org/10.1016/j.dib.2024.110951
dc.language.iso.es_PE.fl_str_mv eng
language eng
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dc.relation.ispartofseries.es_PE.fl_str_mv Data in brief
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eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc/4.0/
dc.format.es_PE.fl_str_mv application/pdf
dc.publisher.es_PE.fl_str_mv Elsevier
dc.publisher.country.es_PE.fl_str_mv US
dc.source.es_PE.fl_str_mv Instituto Nacional de Innovación Agraria
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spelling Estrada Cañari, RichardAragón, LilianaPérez Porras, Wendy E.Romero Avila, YolandaMartínez Vidal, GabrielGarcía, KarinaCruz Luis, JuancarlosArbizu Berrocal, Carlos I.2024-11-04T04:24:01Z2024-11-04T04:24:01Z2024-09-23Estrada-Cañari, R.; Aragón, L.; Pérez-Porras, W.E.; Romero-Avila, R.; Martínez-Vidal, G.; García, K.; Cruz-Luis, J.; & Arbizu-Berrocal, C.I. (2024). Draft genome sequence data of Fusarium verticillioides strain REC01, a phytopathogen isolated from a Peruvian maize. Data in brief, 57(2024), 110951. doi: 10.1016/j.dib.2024.1109512352-3409https://hdl.handle.net/20.500.12955/2601https://doi.org/10.1016/j.dib.2024.110951Fusarium verticillioides represents a major phytopathogenic threat to maize crops worldwide. In this study, we present genomic sequence data of a phytopathogen isolated from a maize stem that shows obvious signs of vascular rot. Using rigorous microbiological identification techniques, we correlated the disease symptoms observed in an affected maize region with the presence of the pathogen. Subsequently, the pathogen was cultured in a suitable fungal growth medium and extensive morphological characterization was performed. In addition, a pathogenicity test was carried out in a DCA model with three treatments and seven repetitions. De novo assembly from Illumina Novaseq 60 0 0 sequencing yielded 456 contigs, which together constitute a 42.8 Mb genome assembly with a GC % content of 48.26. 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