The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast

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Tomato (Solanum lycopersicum) (Solanaceae) is an important vegetable crop worldwide that contains significant amounts of vitamins A and C. It also possesses a powerful antioxidant, lycopene, which can help prevent the development of many forms of cancer. However, this vegetable is highly susceptible...

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Detalles Bibliográficos
Autores: Rodriguez Grados, Pedro Manuel, Saldaña Serrano, Carla Lizet, Estrada Cañari, Richard, Salazar Coronel, Wilian, Contreras Liza, Sergio, Arbizu Berrocal, Carlos Irvin
Formato: objeto de conferencia
Fecha de Publicación:2024
Institución:Instituto Nacional de Innovación Agraria
Repositorio:INIA-Institucional
Lenguaje:inglés
OAI Identifier:oai:null:20.500.12955/2536
Enlace del recurso:https://hdl.handle.net/20.500.12955/2536
Nivel de acceso:acceso abierto
Materia:Horticulture
RT-PCR
ToBRFV
PToMV
Solanum lycopersicum
https://purl.org/pe-repo/ocde/ford#4.04.01
Horticultura
PCR
Viroses
Virosis
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dc.title.es_PE.fl_str_mv The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
title The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
spellingShingle The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
Rodriguez Grados, Pedro Manuel
Horticulture
RT-PCR
ToBRFV
PToMV
Solanum lycopersicum
https://purl.org/pe-repo/ocde/ford#4.04.01
Horticulture
Horticultura
PCR
Viroses
Virosis
Solanum lycopersicum
title_short The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
title_full The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
title_fullStr The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
title_full_unstemmed The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
title_sort The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast
author Rodriguez Grados, Pedro Manuel
author_facet Rodriguez Grados, Pedro Manuel
Saldaña Serrano, Carla Lizet
Estrada Cañari, Richard
Salazar Coronel, Wilian
Contreras Liza, Sergio
Arbizu Berrocal, Carlos Irvin
author_role author
author2 Saldaña Serrano, Carla Lizet
Estrada Cañari, Richard
Salazar Coronel, Wilian
Contreras Liza, Sergio
Arbizu Berrocal, Carlos Irvin
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Rodriguez Grados, Pedro Manuel
Saldaña Serrano, Carla Lizet
Estrada Cañari, Richard
Salazar Coronel, Wilian
Contreras Liza, Sergio
Arbizu Berrocal, Carlos Irvin
dc.subject.es_PE.fl_str_mv Horticulture
RT-PCR
ToBRFV
PToMV
Solanum lycopersicum
topic Horticulture
RT-PCR
ToBRFV
PToMV
Solanum lycopersicum
https://purl.org/pe-repo/ocde/ford#4.04.01
Horticulture
Horticultura
PCR
Viroses
Virosis
Solanum lycopersicum
dc.subject.ocde.es_PE.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.04.01
dc.subject.agrovoc.es_PE.fl_str_mv Horticulture
Horticultura
PCR
Viroses
Virosis
Solanum lycopersicum
description Tomato (Solanum lycopersicum) (Solanaceae) is an important vegetable crop worldwide that contains significant amounts of vitamins A and C. It also possesses a powerful antioxidant, lycopene, which can help prevent the development of many forms of cancer. However, this vegetable is highly susceptible to a number of emerging viruses. Since the first report of ToBRFV in Jordan, this emerging virus has been detected in Germany, Israel, Italy, Mexico, Palestine, and the United States, but its incidence was not reported in Peru. We collected 56 samples of fresh leaves of tomato plants with viral symptoms and 13 without symptoms as control from two regions that comprise more than 50% of tomato production in Peru, Lima and Ica. Mosaic, mottling, plant stunting and brown rugose symptoms were observed in collected leaves that were preserved in liquid nitrogen until processing. We extracted RNA using a commercial Kit. For virus identification, we used the reverse transcription polymerase chain reaction (RT-PCR) technique for the amplification of the capside protein (cp) gene. Specific primers were designed using the NCBI tool by collecting all available cp sequences from Peru Tomato mosaic virus (PToMV) and Tomato Brown Rough Fruit Virus (ToBRV). Results were observed on 1.5 % agarose gels using Gelred(Biotium®, Fremont, CA, USA) and by standard spectrophotometry. We observed the presence of ToBRFV in 24 samples, PToMV in 8 samples and 11 samples presented a mixed infection with ToBRV and PToMV. To the best of our knowledge, this is the first report of ToBRFV in Peru.
publishDate 2024
dc.date.accessioned.none.fl_str_mv 2024-07-06T23:27:45Z
dc.date.available.none.fl_str_mv 2024-07-06T23:27:45Z
dc.date.issued.fl_str_mv 2024-01-19
dc.type.es_PE.fl_str_mv info:eu-repo/semantics/conferenceObject
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dc.identifier.citation.es_PE.fl_str_mv Rodriguez-Grados, P. M.; Saldaña, C. L.; Estrada, R.; Salazar, W.; Contreras-Liza, S.; & Arbizu, C. I. (2024). The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast. The 3rd International Electronic Conference on Plant Sciences, 15-17. https://sciforum.net/paper/view/16808
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12955/2536
identifier_str_mv Rodriguez-Grados, P. M.; Saldaña, C. L.; Estrada, R.; Salazar, W.; Contreras-Liza, S.; & Arbizu, C. I. (2024). The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast. The 3rd International Electronic Conference on Plant Sciences, 15-17. https://sciforum.net/paper/view/16808
url https://hdl.handle.net/20.500.12955/2536
dc.language.iso.es_PE.fl_str_mv eng
language eng
dc.rights.es_PE.fl_str_mv info:eu-repo/semantics/openAccess
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eu_rights_str_mv openAccess
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dc.publisher.es_PE.fl_str_mv MDPI
dc.publisher.country.es_PE.fl_str_mv CH
dc.source.es_PE.fl_str_mv Instituto Nacional de Innovación Agraria
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spelling Rodriguez Grados, Pedro ManuelSaldaña Serrano, Carla LizetEstrada Cañari, RichardSalazar Coronel, WilianContreras Liza, SergioArbizu Berrocal, Carlos Irvin2024-07-06T23:27:45Z2024-07-06T23:27:45Z2024-01-19Rodriguez-Grados, P. M.; Saldaña, C. L.; Estrada, R.; Salazar, W.; Contreras-Liza, S.; & Arbizu, C. I. (2024). The presence of tomato brown rugose fruit virus (ToBRV) in tomatoes from the southern peruvian coast. The 3rd International Electronic Conference on Plant Sciences, 15-17. https://sciforum.net/paper/view/16808https://hdl.handle.net/20.500.12955/2536Tomato (Solanum lycopersicum) (Solanaceae) is an important vegetable crop worldwide that contains significant amounts of vitamins A and C. It also possesses a powerful antioxidant, lycopene, which can help prevent the development of many forms of cancer. However, this vegetable is highly susceptible to a number of emerging viruses. Since the first report of ToBRFV in Jordan, this emerging virus has been detected in Germany, Israel, Italy, Mexico, Palestine, and the United States, but its incidence was not reported in Peru. We collected 56 samples of fresh leaves of tomato plants with viral symptoms and 13 without symptoms as control from two regions that comprise more than 50% of tomato production in Peru, Lima and Ica. Mosaic, mottling, plant stunting and brown rugose symptoms were observed in collected leaves that were preserved in liquid nitrogen until processing. We extracted RNA using a commercial Kit. For virus identification, we used the reverse transcription polymerase chain reaction (RT-PCR) technique for the amplification of the capside protein (cp) gene. Specific primers were designed using the NCBI tool by collecting all available cp sequences from Peru Tomato mosaic virus (PToMV) and Tomato Brown Rough Fruit Virus (ToBRV). Results were observed on 1.5 % agarose gels using Gelred(Biotium®, Fremont, CA, USA) and by standard spectrophotometry. We observed the presence of ToBRFV in 24 samples, PToMV in 8 samples and 11 samples presented a mixed infection with ToBRV and PToMV. 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