Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert

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Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloro...

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Detalles Bibliográficos
Autores: Chávez Galarza, Julio César, Cardenas Ninasivincha, Stefanny, Contreras, Roberto, Ferro Mauricio, Rubén Darío, Huanca Mamani, Wilson
Formato: artículo
Fecha de Publicación:2021
Institución:Instituto Nacional de Innovación Agraria
Repositorio:INIA-Institucional
Lenguaje:inglés
OAI Identifier:oai:null:20.500.12955/1662
Enlace del recurso:https://hdl.handle.net/20.500.12955/1662
https://doi.org/10.1080/23802359.2021.1997122
Nivel de acceso:acceso abierto
Materia:Chloroplast genome
Tillandsia landbeckii
https://purl.org/pe-repo/ocde/ford#4.04.00
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dc.title.es_PE.fl_str_mv Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
spellingShingle Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
Chávez Galarza, Julio César
Chloroplast genome
Tillandsia landbeckii
https://purl.org/pe-repo/ocde/ford#4.04.00
title_short Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_full Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_fullStr Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_full_unstemmed Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_sort Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
author Chávez Galarza, Julio César
author_facet Chávez Galarza, Julio César
Cardenas Ninasivincha, Stefanny
Contreras, Roberto
Ferro Mauricio, Rubén Darío
Huanca Mamani, Wilson
author_role author
author2 Cardenas Ninasivincha, Stefanny
Contreras, Roberto
Ferro Mauricio, Rubén Darío
Huanca Mamani, Wilson
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Chávez Galarza, Julio César
Cardenas Ninasivincha, Stefanny
Contreras, Roberto
Ferro Mauricio, Rubén Darío
Huanca Mamani, Wilson
dc.subject.es_PE.fl_str_mv Chloroplast genome
Tillandsia landbeckii
topic Chloroplast genome
Tillandsia landbeckii
https://purl.org/pe-repo/ocde/ford#4.04.00
dc.subject.ocde.es_PE.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.04.00
description Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support.
publishDate 2021
dc.date.accessioned.none.fl_str_mv 2022-04-13T21:18:23Z
dc.date.available.none.fl_str_mv 2022-04-13T21:18:23Z
dc.date.issued.fl_str_mv 2021-11-10
dc.type.es_PE.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.es_PE.fl_str_mv Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert. Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377. doi: 10.1080/23802359.2021.1997122
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12955/1662
dc.identifier.journal.es_PE.fl_str_mv Mitochondrial DNA Part B
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1080/23802359.2021.1997122
identifier_str_mv Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert. Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377. doi: 10.1080/23802359.2021.1997122
Mitochondrial DNA Part B
url https://hdl.handle.net/20.500.12955/1662
https://doi.org/10.1080/23802359.2021.1997122
dc.language.iso.es_PE.fl_str_mv eng
language eng
dc.relation.ispartof.es_PE.fl_str_mv Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377
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dc.publisher.es_PE.fl_str_mv Taylor & Francis
dc.publisher.country.es_PE.fl_str_mv Reino Unido
dc.source.es_PE.fl_str_mv Instituto Nacional de Innovación Agraria
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spelling Chávez Galarza, Julio CésarCardenas Ninasivincha, StefannyContreras, RobertoFerro Mauricio, Rubén DaríoHuanca Mamani, WilsonPerú2022-04-13T21:18:23Z2022-04-13T21:18:23Z2021-11-10Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert. Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377. doi: 10.1080/23802359.2021.1997122https://hdl.handle.net/20.500.12955/1662Mitochondrial DNA Part Bhttps://doi.org/10.1080/23802359.2021.1997122Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support.application/pdfengTaylor & FrancisReino UnidoMitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377https://doi.org/10.1080/23802359.2021.1997122info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/Instituto Nacional de Innovación AgrariaRepositorio Institucional - INIAreponame:INIA-Institucionalinstname:Instituto Nacional de Innovación Agrariainstacron:INIAChloroplast genomeTillandsia landbeckiihttps://purl.org/pe-repo/ocde/ford#4.04.00Chloroplast genome of Tillandsia landbeckii Phil. 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