Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
Descripción del Articulo
Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloro...
Autores: | , , , , |
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Formato: | artículo |
Fecha de Publicación: | 2021 |
Institución: | Instituto Nacional de Innovación Agraria |
Repositorio: | INIA-Institucional |
Lenguaje: | inglés |
OAI Identifier: | oai:null:20.500.12955/1662 |
Enlace del recurso: | https://hdl.handle.net/20.500.12955/1662 https://doi.org/10.1080/23802359.2021.1997122 |
Nivel de acceso: | acceso abierto |
Materia: | Chloroplast genome Tillandsia landbeckii https://purl.org/pe-repo/ocde/ford#4.04.00 |
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dc.title.es_PE.fl_str_mv |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
title |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
spellingShingle |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert Chávez Galarza, Julio César Chloroplast genome Tillandsia landbeckii https://purl.org/pe-repo/ocde/ford#4.04.00 |
title_short |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
title_full |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
title_fullStr |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
title_full_unstemmed |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
title_sort |
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
author |
Chávez Galarza, Julio César |
author_facet |
Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
author_role |
author |
author2 |
Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
dc.subject.es_PE.fl_str_mv |
Chloroplast genome Tillandsia landbeckii |
topic |
Chloroplast genome Tillandsia landbeckii https://purl.org/pe-repo/ocde/ford#4.04.00 |
dc.subject.ocde.es_PE.fl_str_mv |
https://purl.org/pe-repo/ocde/ford#4.04.00 |
description |
Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support. |
publishDate |
2021 |
dc.date.accessioned.none.fl_str_mv |
2022-04-13T21:18:23Z |
dc.date.available.none.fl_str_mv |
2022-04-13T21:18:23Z |
dc.date.issued.fl_str_mv |
2021-11-10 |
dc.type.es_PE.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
dc.identifier.citation.es_PE.fl_str_mv |
Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert. Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377. doi: 10.1080/23802359.2021.1997122 |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12955/1662 |
dc.identifier.journal.es_PE.fl_str_mv |
Mitochondrial DNA Part B |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1080/23802359.2021.1997122 |
identifier_str_mv |
Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert. Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377. doi: 10.1080/23802359.2021.1997122 Mitochondrial DNA Part B |
url |
https://hdl.handle.net/20.500.12955/1662 https://doi.org/10.1080/23802359.2021.1997122 |
dc.language.iso.es_PE.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.es_PE.fl_str_mv |
Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377 |
dc.relation.publisherversion.es_PE.fl_str_mv |
https://doi.org/10.1080/23802359.2021.1997122 |
dc.rights.es_PE.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.es_PE.fl_str_mv |
https://creativecommons.org/licenses/by-nc-nd/4.0/ |
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openAccess |
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https://creativecommons.org/licenses/by-nc-nd/4.0/ |
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application/pdf |
dc.coverage.spatial.es_PE.fl_str_mv |
Perú |
dc.publisher.es_PE.fl_str_mv |
Taylor & Francis |
dc.publisher.country.es_PE.fl_str_mv |
Reino Unido |
dc.source.es_PE.fl_str_mv |
Instituto Nacional de Innovación Agraria |
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Chávez Galarza, Julio CésarCardenas Ninasivincha, StefannyContreras, RobertoFerro Mauricio, Rubén DaríoHuanca Mamani, WilsonPerú2022-04-13T21:18:23Z2022-04-13T21:18:23Z2021-11-10Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert. Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377. doi: 10.1080/23802359.2021.1997122https://hdl.handle.net/20.500.12955/1662Mitochondrial DNA Part Bhttps://doi.org/10.1080/23802359.2021.1997122Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support.application/pdfengTaylor & FrancisReino UnidoMitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377https://doi.org/10.1080/23802359.2021.1997122info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/Instituto Nacional de Innovación AgrariaRepositorio Institucional - INIAreponame:INIA-Institucionalinstname:Instituto Nacional de Innovación Agrariainstacron:INIAChloroplast genomeTillandsia landbeckiihttps://purl.org/pe-repo/ocde/ford#4.04.00Chloroplast genome of Tillandsia landbeckii Phil. 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La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).