Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay
Descripción del Articulo
Tuberculosis phenotypic detection assays are commonly used in low-resource countries. Therefore, reliable detection methods are crucial for early diagnosis and treatment. The microscopic observation drug susceptibility (MODS) assay is a culture-based test to detect Mycobacterium tuberculosis and cha...
| Autores: | , , , , , , , , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2022 |
| Institución: | Universidad Peruana de Ciencias Aplicadas |
| Repositorio: | UPC-Institucional |
| Lenguaje: | inglés |
| OAI Identifier: | oai:repositorioacademico.upc.edu.pe:10757/668775 |
| Enlace del recurso: | http://hdl.handle.net/10757/668775 |
| Nivel de acceso: | acceso abierto |
| Materia: | Culture media Diagnosis Drug susceptibility test MODS Tuberculosis |
| id |
UUPC_c2aac60f0e21461f4a1de66f441a4ed4 |
|---|---|
| oai_identifier_str |
oai:repositorioacademico.upc.edu.pe:10757/668775 |
| network_acronym_str |
UUPC |
| network_name_str |
UPC-Institucional |
| repository_id_str |
2670 |
| dc.title.es_PE.fl_str_mv |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay |
| title |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay |
| spellingShingle |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay Rodriguez, Jhojailith Culture media Diagnosis Drug susceptibility test MODS Tuberculosis |
| title_short |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay |
| title_full |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay |
| title_fullStr |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay |
| title_full_unstemmed |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay |
| title_sort |
Evaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assay |
| author |
Rodriguez, Jhojailith |
| author_facet |
Rodriguez, Jhojailith Alcántara, Roberto Rodríguez, Joseline Vargas, Johnny Roncal, Elisa Antiparra, Ricardo Gilman, Robert H. Grandjean, Louis Moore, David Zimic, Mirko Sheen, Patricia |
| author_role |
author |
| author2 |
Alcántara, Roberto Rodríguez, Joseline Vargas, Johnny Roncal, Elisa Antiparra, Ricardo Gilman, Robert H. Grandjean, Louis Moore, David Zimic, Mirko Sheen, Patricia |
| author2_role |
author author author author author author author author author author |
| dc.contributor.author.fl_str_mv |
Rodriguez, Jhojailith Alcántara, Roberto Rodríguez, Joseline Vargas, Johnny Roncal, Elisa Antiparra, Ricardo Gilman, Robert H. Grandjean, Louis Moore, David Zimic, Mirko Sheen, Patricia |
| dc.subject.es_PE.fl_str_mv |
Culture media Diagnosis Drug susceptibility test MODS Tuberculosis |
| topic |
Culture media Diagnosis Drug susceptibility test MODS Tuberculosis |
| description |
Tuberculosis phenotypic detection assays are commonly used in low-resource countries. Therefore, reliable detection methods are crucial for early diagnosis and treatment. The microscopic observation drug susceptibility (MODS) assay is a culture-based test to detect Mycobacterium tuberculosis and characterize drug resistance in 7–10 days directly from sputum. The use of MODS is limited by the availability of supplies necessary for preparing the enriched culture. In this study, we evaluated three dry culture media that are easier to produce and cheaper than the standard one used in MODS [1]: an unsterilized powder-based mixed (Boldú et al., 2007) [2], a sterile-lyophilized medium, and (Sengstake et al., 2017) [3] an irradiated powder-based mixed. Mycobacterial growth and drug susceptibility were evaluated for rifampin, isoniazid, and pyrazinamide (PZA). The alternative cultures were evaluated using 282 sputum samples with positive acid-fast smears. No significant differences were observed in the positivity test rates. The positivity time showed high correlations (Rho) of 0.925, 0.889, and 0.866 between each of the three alternative media and the standard. Susceptibility testing for MDR and PZA showed an excellent concordance of 1 compared to the reference test. These results demonstrate that dry culture media are appropriate and advantageous for use in MODS in low-resource settings. |
| publishDate |
2022 |
| dc.date.accessioned.none.fl_str_mv |
2023-09-26T17:53:36Z |
| dc.date.available.none.fl_str_mv |
2023-09-26T17:53:36Z |
| dc.date.issued.fl_str_mv |
2022-12-01 |
| dc.type.es_PE.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| dc.identifier.issn.none.fl_str_mv |
14729792 |
| dc.identifier.doi.none.fl_str_mv |
10.1016/j.tube.2022.102273 |
| dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10757/668775 |
| dc.identifier.eissn.none.fl_str_mv |
1873281X |
| dc.identifier.journal.es_PE.fl_str_mv |
Tuberculosis |
| dc.identifier.eid.none.fl_str_mv |
2-s2.0-85142152288 |
| dc.identifier.scopusid.none.fl_str_mv |
SCOPUS_ID:85142152288 |
| dc.identifier.pii.none.fl_str_mv |
S147297922200110X |
| dc.identifier.isni.none.fl_str_mv |
0000 0001 2196 144X |
| dc.identifier.ror.none.fl_str_mv |
047xrr705 |
| identifier_str_mv |
14729792 10.1016/j.tube.2022.102273 1873281X Tuberculosis 2-s2.0-85142152288 SCOPUS_ID:85142152288 S147297922200110X 0000 0001 2196 144X 047xrr705 |
| url |
http://hdl.handle.net/10757/668775 |
| dc.language.iso.es_PE.fl_str_mv |
eng |
| language |
eng |
| dc.relation.url.es_PE.fl_str_mv |
https://www.sciencedirect.com/science/article/abs/pii/S147297922200110X |
| dc.rights.es_PE.fl_str_mv |
info:eu-repo/semantics/openAccess |
| dc.rights.*.fl_str_mv |
Attribution-NonCommercial-ShareAlike 4.0 International |
| dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by-nc-sa/4.0/ |
| eu_rights_str_mv |
openAccess |
| rights_invalid_str_mv |
Attribution-NonCommercial-ShareAlike 4.0 International http://creativecommons.org/licenses/by-nc-sa/4.0/ |
| dc.format.es_PE.fl_str_mv |
application/pdf |
| dc.publisher.es_PE.fl_str_mv |
Churchill Livingstone |
| dc.source.es_PE.fl_str_mv |
Universidad Peruana de Ciencias Aplicadas (UPC) Repositorio Academico - UPC |
| dc.source.none.fl_str_mv |
reponame:UPC-Institucional instname:Universidad Peruana de Ciencias Aplicadas instacron:UPC |
| instname_str |
Universidad Peruana de Ciencias Aplicadas |
| instacron_str |
UPC |
| institution |
UPC |
| reponame_str |
UPC-Institucional |
| collection |
UPC-Institucional |
| dc.source.journaltitle.none.fl_str_mv |
Tuberculosis |
| dc.source.volume.none.fl_str_mv |
137 |
| bitstream.url.fl_str_mv |
https://repositorioacademico.upc.edu.pe/bitstream/10757/668775/2/license.txt https://repositorioacademico.upc.edu.pe/bitstream/10757/668775/1/license_rdf |
| bitstream.checksum.fl_str_mv |
8a4605be74aa9ea9d79846c1fba20a33 934f4ca17e109e0a05eaeaba504d7ce4 |
| bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 |
| repository.name.fl_str_mv |
Repositorio académico upc |
| repository.mail.fl_str_mv |
upc@openrepository.com |
| _version_ |
1846065942974431232 |
| spelling |
167f205996c6db7712bd7c7768641d2430071f3152ea5a9e4e9511367f5983250b75005f2ebc32a2bbfa81df99746776061245f5d6ce859c2c7ec6e7adddf6325f7c73f7e43f25fbf99c7db05096f74f3d04e730072db4e4464725d01930da0dc87b29c27500642e4cce7d70eddf2bcbcc0d3c0275065001b4969f58e515ed67fb2db4abf73a523300eca4eedac4960033c12b99a2a234ca53c19626d4520b88695b4b39a9938350325002a40359cc7499c265774b0e8e041ac89500Rodriguez, JhojailithAlcántara, RobertoRodríguez, JoselineVargas, JohnnyRoncal, ElisaAntiparra, RicardoGilman, Robert H.Grandjean, LouisMoore, DavidZimic, MirkoSheen, Patricia2023-09-26T17:53:36Z2023-09-26T17:53:36Z2022-12-011472979210.1016/j.tube.2022.102273http://hdl.handle.net/10757/6687751873281XTuberculosis2-s2.0-85142152288SCOPUS_ID:85142152288S147297922200110X0000 0001 2196 144X047xrr705Tuberculosis phenotypic detection assays are commonly used in low-resource countries. Therefore, reliable detection methods are crucial for early diagnosis and treatment. The microscopic observation drug susceptibility (MODS) assay is a culture-based test to detect Mycobacterium tuberculosis and characterize drug resistance in 7–10 days directly from sputum. The use of MODS is limited by the availability of supplies necessary for preparing the enriched culture. In this study, we evaluated three dry culture media that are easier to produce and cheaper than the standard one used in MODS [1]: an unsterilized powder-based mixed (Boldú et al., 2007) [2], a sterile-lyophilized medium, and (Sengstake et al., 2017) [3] an irradiated powder-based mixed. Mycobacterial growth and drug susceptibility were evaluated for rifampin, isoniazid, and pyrazinamide (PZA). The alternative cultures were evaluated using 282 sputum samples with positive acid-fast smears. No significant differences were observed in the positivity test rates. The positivity time showed high correlations (Rho) of 0.925, 0.889, and 0.866 between each of the three alternative media and the standard. Susceptibility testing for MDR and PZA showed an excellent concordance of 1 compared to the reference test. These results demonstrate that dry culture media are appropriate and advantageous for use in MODS in low-resource settings.Consejo Nacional de Ciencia, Tecnología e Innovación TecnológicaRevisión por paresapplication/pdfengChurchill Livingstonehttps://www.sciencedirect.com/science/article/abs/pii/S147297922200110Xinfo:eu-repo/semantics/openAccessAttribution-NonCommercial-ShareAlike 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-sa/4.0/Universidad Peruana de Ciencias Aplicadas (UPC)Repositorio Academico - UPCTuberculosis137reponame:UPC-Institucionalinstname:Universidad Peruana de Ciencias Aplicadasinstacron:UPCCulture mediaDiagnosisDrug susceptibility testMODSTuberculosisEvaluation of three alternatives cost-effective culture media for Mycobacterium tuberculosis detection and drug susceptibility determination using the microscopic observation drug susceptibility (MODS) assayinfo:eu-repo/semantics/articleLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorioacademico.upc.edu.pe/bitstream/10757/668775/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52falseCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-81031https://repositorioacademico.upc.edu.pe/bitstream/10757/668775/1/license_rdf934f4ca17e109e0a05eaeaba504d7ce4MD51false10757/668775oai:repositorioacademico.upc.edu.pe:10757/6687752023-09-26 17:53:36.952Repositorio académico upcupc@openrepository.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 |
| score |
13.905282 |
Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).