Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru
Descripción del Articulo
The present study assessed the diagnostic performance of the Xpert®Xpress SARS-CoV-2 test in comparison with the Charité protocol real-time RT PCR for the detection of SARS-CoV-2 in Peruvian patients. This was a diagnostic test study that included 100 nasal and pharyngeal swab samples. We obtained a...
| Autores: | , , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2024 |
| Institución: | Universidad Peruana de Ciencias Aplicadas |
| Repositorio: | UPC-Institucional |
| Lenguaje: | inglés |
| OAI Identifier: | oai:repositorioacademico.upc.edu.pe:10757/675841 |
| Enlace del recurso: | https://doi.org/10.17843/rpmesp.2024.411.13046 http://hdl.handle.net/10757/675841 |
| Nivel de acceso: | acceso abierto |
| Materia: | COVID-19 Molecular Diagnostic Techniques PCR Peru (source: MeSH NLM) SARS-CoV-2 Sensitivity and Specificity https://purl.org/pe-repo/ocde/ford#3.00.00 |
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f8c0737c3022fcf9c1a616a70410c46b500663f39364e33a510279b33c7d0e1b77951fc8b6e070a65ac5637b1fcf2bc3580300e54aba14617e154aa1d3abf0ecbc662012f5cf37454bb3a99b1fa7d896914068500Puyén, Zully M.Araujo-Castillo, RogerGiraldo, JorgeGutierrez, KarinaRojas-Serrano, Nancy2024-09-24T00:36:36Z2024-09-24T00:36:36Z2024-01-0117264634https://doi.org/10.17843/rpmesp.2024.411.13046http://hdl.handle.net/10757/67584117264642Revista Peruana de Medicina Experimental y Salud Publica2-s2.0-85194847445SCOPUS_ID:851948474450000 0001 2196 144X047xrr705The present study assessed the diagnostic performance of the Xpert®Xpress SARS-CoV-2 test in comparison with the Charité protocol real-time RT PCR for the detection of SARS-CoV-2 in Peruvian patients. This was a diagnostic test study that included 100 nasal and pharyngeal swab samples. We obtained an overall concordance of 98.70% (95%CI: 92.98-99.97), with a kappa coefficient of 0.97 (95%CI: 0.86-1.00) and sensitivity and relative specificity rates of 100% and 96.15%, respectively. Additionally, the percentage of the area under the ROC curve was 98.08% in both cases, and an analytical specificity rate of 100% was obtained for the different respiratory viruses evaluated. In conclusion, the Xpert®Xpress SARS-CoV-2 test, by using nasal and pharyngeal swab samples, was highly sensitive and specific, and the kappa coefficient showed an excellent correlation when compared to the reference testRevisión por paresapplication/pdfengInstituto Nacional de Saludinfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/4.0/Universidad Peruana de Ciencias Aplicadas (UPC)Repositorio Academico - UPCRevista Peruana de Medicina Experimental y Salud Publica4117682reponame:UPC-Institucionalinstname:Universidad Peruana de Ciencias Aplicadasinstacron:UPCCOVID-19Molecular Diagnostic TechniquesPCRPeru (source: MeSH NLM)SARS-CoV-2Sensitivity and Specificityhttps://purl.org/pe-repo/ocde/ford#3.00.00Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peruinfo:eu-repo/semantics/articlehttp://purl.org/coar/version/c_970fb48d4fbd8a12892024-09-24T00:36:38ZPublicationORIGINALrpmesp-41-01-13046.pdfrpmesp-41-01-13046.pdfapplication/pdf197730https://upc.dspace7.openrepository.com/bitstreams/bbec4b75-d412-5e94-899e-f526d44b958b/download7fbe7f556001410879b576dbb1e2f526MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8805https://upc.dspace7.openrepository.com/bitstreams/376f2910-f968-5ca4-924f-308dbea65616/download4460e5956bc1d1639be9ae6146a50347MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://upc.dspace7.openrepository.com/bitstreams/5eae839c-2d38-5879-b972-af131912b562/download8a4605be74aa9ea9d79846c1fba20a33MD53TEXTrpmesp-41-01-13046.pdf.txtrpmesp-41-01-13046.pdf.txtExtracted texttext/plain27669https://upc.dspace7.openrepository.com/bitstreams/91d07ff0-3540-5e07-a2eb-0a4102bfc45c/download1d92d0c75310d612a7328bf578bb0104MD54THUMBNAILrpmesp-41-01-13046.pdf.jpgrpmesp-41-01-13046.pdf.jpgGenerated Thumbnailimage/jpeg96503https://upc.dspace7.openrepository.com/bitstreams/d1ea2d2d-7832-5c9e-9405-b2b9278cb6c5/download44bb9238f3b635c69320991ae80d5db4MD5510757/675841oai:upc.dspace7.openrepository.com:10757/6758412026-02-17 17:45:04.551http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessopen.accesshttps://upc.dspace7.openrepository.comRepositorio académico upcrepositorioacademico@upc.edu.pe |
| dc.title.es_PE.fl_str_mv |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru |
| title |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru |
| spellingShingle |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru Puyén, Zully M. COVID-19 Molecular Diagnostic Techniques PCR Peru (source: MeSH NLM) SARS-CoV-2 Sensitivity and Specificity https://purl.org/pe-repo/ocde/ford#3.00.00 |
| title_short |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru |
| title_full |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru |
| title_fullStr |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru |
| title_full_unstemmed |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru |
| title_sort |
Diagnostic performance of a point-of-care molecular system for the detection of sars-cov-2 in Peru |
| author |
Puyén, Zully M. |
| author_facet |
Puyén, Zully M. Araujo-Castillo, Roger Giraldo, Jorge Gutierrez, Karina Rojas-Serrano, Nancy |
| author_role |
author |
| author2 |
Araujo-Castillo, Roger Giraldo, Jorge Gutierrez, Karina Rojas-Serrano, Nancy |
| author2_role |
author author author author |
| dc.contributor.author.fl_str_mv |
Puyén, Zully M. Araujo-Castillo, Roger Giraldo, Jorge Gutierrez, Karina Rojas-Serrano, Nancy |
| dc.subject.es_PE.fl_str_mv |
COVID-19 Molecular Diagnostic Techniques PCR Peru (source: MeSH NLM) SARS-CoV-2 Sensitivity and Specificity |
| topic |
COVID-19 Molecular Diagnostic Techniques PCR Peru (source: MeSH NLM) SARS-CoV-2 Sensitivity and Specificity https://purl.org/pe-repo/ocde/ford#3.00.00 |
| dc.subject.ocde.none.fl_str_mv |
https://purl.org/pe-repo/ocde/ford#3.00.00 |
| description |
The present study assessed the diagnostic performance of the Xpert®Xpress SARS-CoV-2 test in comparison with the Charité protocol real-time RT PCR for the detection of SARS-CoV-2 in Peruvian patients. This was a diagnostic test study that included 100 nasal and pharyngeal swab samples. We obtained an overall concordance of 98.70% (95%CI: 92.98-99.97), with a kappa coefficient of 0.97 (95%CI: 0.86-1.00) and sensitivity and relative specificity rates of 100% and 96.15%, respectively. Additionally, the percentage of the area under the ROC curve was 98.08% in both cases, and an analytical specificity rate of 100% was obtained for the different respiratory viruses evaluated. In conclusion, the Xpert®Xpress SARS-CoV-2 test, by using nasal and pharyngeal swab samples, was highly sensitive and specific, and the kappa coefficient showed an excellent correlation when compared to the reference test |
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2024 |
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2024-09-24T00:36:36Z |
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2024-09-24T00:36:36Z |
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2024-01-01 |
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info:eu-repo/semantics/article |
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Revista Peruana de Medicina Experimental y Salud Publica |
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Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).