Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
Descripción del Articulo
The genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA...
Autores: | , , , , , , , , , |
---|---|
Formato: | artículo |
Fecha de Publicación: | 2016 |
Institución: | Universidad Peruana de Ciencias Aplicadas |
Repositorio: | UPC-Institucional |
Lenguaje: | inglés |
OAI Identifier: | oai:repositorioacademico.upc.edu.pe:10757/607302 |
Enlace del recurso: | http://hdl.handle.net/10757/607302 |
Nivel de acceso: | acceso abierto |
Materia: | Circadian gene Placental abruption Pregnancy Placentae SNPs |
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UUPC_4a0569f34da7aa2563f9ad8d06a042da |
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oai:repositorioacademico.upc.edu.pe:10757/607302 |
network_acronym_str |
UUPC |
network_name_str |
UPC-Institucional |
repository_id_str |
2670 |
dc.title.es_PE.fl_str_mv |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption |
title |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption |
spellingShingle |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption Chunfang, Qiu Circadian gene Placental abruption Pregnancy Pregnancy Placentae SNPs |
title_short |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption |
title_full |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption |
title_fullStr |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption |
title_full_unstemmed |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption |
title_sort |
Placental genetic variations in circadian clock-related genes increase the risk of placental abruption |
author |
Chunfang, Qiu |
author_facet |
Chunfang, Qiu Gelaye, Bizu Denis, Marie Tadesse, Mahlet G. Enquobahrie, Daniel A. Ananth, Cande V. Pacora, Percy N. Salazar, Manuel Sanchez, Sixto E. Williams, Michelle A. |
author_role |
author |
author2 |
Gelaye, Bizu Denis, Marie Tadesse, Mahlet G. Enquobahrie, Daniel A. Ananth, Cande V. Pacora, Percy N. Salazar, Manuel Sanchez, Sixto E. Williams, Michelle A. |
author2_role |
author author author author author author author author author |
dc.contributor.email.es_PE.fl_str_mv |
Chun-fang.Qiu@Swedish.org |
dc.contributor.author.fl_str_mv |
Chunfang, Qiu Gelaye, Bizu Denis, Marie Tadesse, Mahlet G. Enquobahrie, Daniel A. Ananth, Cande V. Pacora, Percy N. Salazar, Manuel Sanchez, Sixto E. Williams, Michelle A. |
dc.subject.es_PE.fl_str_mv |
Circadian gene Placental abruption Pregnancy Pregnancy Placentae SNPs |
topic |
Circadian gene Placental abruption Pregnancy Pregnancy Placentae SNPs |
description |
The genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA cases and 244 controls. Genotyping was performed using the Illumina Cardio-MetaboChip. We examined 116 SNPs in 13 genes known to moderate circadian rhythms. Logistic regression models were fit to estimate odds ratios (ORs). The combined effect of multiple SNPs on PA risk was estimated using a weighted genetic risk score. We examined independent and joint associations of wGRS derived from placental and maternal genomes with PA. Seven SNPs in five genes (ARNTL2, CRY2, DEC1, PER3 and RORA), in the placental genome, were associated with PA risk. Each copy of the minor allele (G) of a SNP in the RORA gene (rs2899663) was associated with a 30% reduced odds of PA (95% CI 0.52-0.95). The odds of PA increased with increasing placental-wGRS (Ptrend<0.001). The ORs were 1.00, 2.16, 3.24 and 4.48 across quartiles. Associations persisted after the maternal-wGRS was included in the model. There was evidence of an additive contribution of placental and maternal genetic contributions to PA risk. Participants with placental- and maternal-wGRS in the highest quartile, compared with those in the lowest quartile, had a 15.57-fold (95% CI 3.34- 72.60) increased odds of PA. Placental variants in circadian clock-related genes are associated with PA risk; and the association persists after control of genetic variants in the maternal genome |
publishDate |
2016 |
dc.date.accessioned.es_PE.fl_str_mv |
2016-04-28T16:09:07Z |
dc.date.available.es_PE.fl_str_mv |
2016-04-28T16:09:07Z |
dc.date.issued.fl_str_mv |
2016-03 |
dc.type.es_PE.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
dc.identifier.issn.es_PE.fl_str_mv |
1948-1756 |
dc.identifier.uri.es_PE.fl_str_mv |
http://hdl.handle.net/10757/607302 |
dc.identifier.journal.es_PE.fl_str_mv |
International Journal of Molecular Epidemiology and Genetics (Int J Mol Epidemiol Genet) |
identifier_str_mv |
1948-1756 International Journal of Molecular Epidemiology and Genetics (Int J Mol Epidemiol Genet) |
url |
http://hdl.handle.net/10757/607302 |
dc.language.iso.es_PE.fl_str_mv |
eng |
language |
eng |
dc.relation.url.es_PE.fl_str_mv |
http://www.ijmeg.org/IJMEG_V7N1.html |
dc.rights.es_PE.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.es_PE.fl_str_mv |
application/pdf |
dc.publisher.es_PE.fl_str_mv |
International Journal of Molecular Epidemiology and Genetics |
dc.source.es_PE.fl_str_mv |
Universidad Peruana de Ciencias Aplicadas (UPC) Repositorio Académico - UPC |
dc.source.none.fl_str_mv |
reponame:UPC-Institucional instname:Universidad Peruana de Ciencias Aplicadas instacron:UPC |
instname_str |
Universidad Peruana de Ciencias Aplicadas |
instacron_str |
UPC |
institution |
UPC |
reponame_str |
UPC-Institucional |
collection |
UPC-Institucional |
bitstream.url.fl_str_mv |
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Chunfang, QiuGelaye, BizuDenis, MarieTadesse, Mahlet G.Enquobahrie, Daniel A.Ananth, Cande V.Pacora, Percy N.Salazar, ManuelSanchez, Sixto E.Williams, Michelle A.Chun-fang.Qiu@Swedish.org2016-04-28T16:09:07Z2016-04-28T16:09:07Z2016-031948-1756http://hdl.handle.net/10757/607302International Journal of Molecular Epidemiology and Genetics (Int J Mol Epidemiol Genet)The genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA cases and 244 controls. Genotyping was performed using the Illumina Cardio-MetaboChip. We examined 116 SNPs in 13 genes known to moderate circadian rhythms. Logistic regression models were fit to estimate odds ratios (ORs). The combined effect of multiple SNPs on PA risk was estimated using a weighted genetic risk score. We examined independent and joint associations of wGRS derived from placental and maternal genomes with PA. Seven SNPs in five genes (ARNTL2, CRY2, DEC1, PER3 and RORA), in the placental genome, were associated with PA risk. Each copy of the minor allele (G) of a SNP in the RORA gene (rs2899663) was associated with a 30% reduced odds of PA (95% CI 0.52-0.95). The odds of PA increased with increasing placental-wGRS (Ptrend<0.001). The ORs were 1.00, 2.16, 3.24 and 4.48 across quartiles. Associations persisted after the maternal-wGRS was included in the model. There was evidence of an additive contribution of placental and maternal genetic contributions to PA risk. Participants with placental- and maternal-wGRS in the highest quartile, compared with those in the lowest quartile, had a 15.57-fold (95% CI 3.34- 72.60) increased odds of PA. Placental variants in circadian clock-related genes are associated with PA risk; and the association persists after control of genetic variants in the maternal genomeRevisión por paresapplication/pdfengInternational Journal of Molecular Epidemiology and Geneticshttp://www.ijmeg.org/IJMEG_V7N1.htmlinfo:eu-repo/semantics/openAccessUniversidad Peruana de Ciencias Aplicadas (UPC)Repositorio Académico - UPCreponame:UPC-Institucionalinstname:Universidad Peruana de Ciencias Aplicadasinstacron:UPCCircadian geneb4dd3699-7fc8-4771-b1dc-b4ce2062ebf2600Placental abruptionaa42db39-8547-437a-b829-0c191233f7db600Pregnancy00b8bd68-d9d8-411d-92a6-e1d8f74cba26600Pregnancy00b8bd68-d9d8-411d-92a6-e1d8f74cba26600Placentae3a18bdb9-ea23-44b4-8266-66210145ebd6600SNPsdeb5a9c5-d1a8-4381-ab51-9faeb808a0e9600Placental genetic variations in circadian clock-related genes increase the risk of placental abruptioninfo:eu-repo/semantics/article2018-06-17T18:46:16ZThe genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA cases and 244 controls. Genotyping was performed using the Illumina Cardio-MetaboChip. We examined 116 SNPs in 13 genes known to moderate circadian rhythms. Logistic regression models were fit to estimate odds ratios (ORs). The combined effect of multiple SNPs on PA risk was estimated using a weighted genetic risk score. We examined independent and joint associations of wGRS derived from placental and maternal genomes with PA. Seven SNPs in five genes (ARNTL2, CRY2, DEC1, PER3 and RORA), in the placental genome, were associated with PA risk. Each copy of the minor allele (G) of a SNP in the RORA gene (rs2899663) was associated with a 30% reduced odds of PA (95% CI 0.52-0.95). The odds of PA increased with increasing placental-wGRS (P<sub>trend</sub><0.001). The ORs were 1.00, 2.16, 3.24 and 4.48 across quartiles. Associations persisted after the maternal-wGRS was included in the model. There was evidence of an additive contribution of placental and maternal genetic contributions to PA risk. Participants with placental- and maternal-wGRS in the highest quartile, compared with those in the lowest quartile, had a 15.57-fold (95% CI 3.34- 72.60) increased odds of PA. Placental variants in circadian clock-related genes are associated with PA risk; and the association persists after control of genetic variants in the maternal genomeORIGINALijmeg0024358.pdfijmeg0024358.pdfapplication/pdf388096https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/1/ijmeg0024358.pdf9747a4f5ae8be733a3d97ce1090fa4abMD51trueLICENSElicense.txtlicense.txttext/plain; charset=utf-81659https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/2/license.txt1ed8f33c5404431ad7aabc05080746c5MD52falseTEXTijmeg0024358.pdf.txtijmeg0024358.pdf.txtExtracted Texttext/plain33827https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/3/ijmeg0024358.pdf.txt3e644cb1416a35cb199eab085605eab6MD53falseTHUMBNAILijmeg0024358.pdf.jpgijmeg0024358.pdf.jpgGenerated Thumbnailimage/jpeg121551https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/4/ijmeg0024358.pdf.jpgf86c4685e26f18b18c5c66b2d606637cMD54false10757/607302oai:repositorioacademico.upc.edu.pe:10757/6073022019-08-30 07:50:34.913Repositorio académico upcupc@openrepository.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 |
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La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).