Placental genetic variations in circadian clock-related genes increase the risk of placental abruption

Descripción del Articulo

The genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA...

Descripción completa

Detalles Bibliográficos
Autores: Chunfang, Qiu, Gelaye, Bizu, Denis, Marie, Tadesse, Mahlet G., Enquobahrie, Daniel A., Ananth, Cande V., Pacora, Percy N., Salazar, Manuel, Sanchez, Sixto E., Williams, Michelle A.
Formato: artículo
Fecha de Publicación:2016
Institución:Universidad Peruana de Ciencias Aplicadas
Repositorio:UPC-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorioacademico.upc.edu.pe:10757/607302
Enlace del recurso:http://hdl.handle.net/10757/607302
Nivel de acceso:acceso abierto
Materia:Circadian gene
Placental abruption
Pregnancy
Placentae
SNPs
id UUPC_4a0569f34da7aa2563f9ad8d06a042da
oai_identifier_str oai:repositorioacademico.upc.edu.pe:10757/607302
network_acronym_str UUPC
network_name_str UPC-Institucional
repository_id_str 2670
dc.title.es_PE.fl_str_mv Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
title Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
spellingShingle Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
Chunfang, Qiu
Circadian gene
Placental abruption
Pregnancy
Pregnancy
Placentae
SNPs
title_short Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
title_full Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
title_fullStr Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
title_full_unstemmed Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
title_sort Placental genetic variations in circadian clock-related genes increase the risk of placental abruption
author Chunfang, Qiu
author_facet Chunfang, Qiu
Gelaye, Bizu
Denis, Marie
Tadesse, Mahlet G.
Enquobahrie, Daniel A.
Ananth, Cande V.
Pacora, Percy N.
Salazar, Manuel
Sanchez, Sixto E.
Williams, Michelle A.
author_role author
author2 Gelaye, Bizu
Denis, Marie
Tadesse, Mahlet G.
Enquobahrie, Daniel A.
Ananth, Cande V.
Pacora, Percy N.
Salazar, Manuel
Sanchez, Sixto E.
Williams, Michelle A.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.email.es_PE.fl_str_mv Chun-fang.Qiu@Swedish.org
dc.contributor.author.fl_str_mv Chunfang, Qiu
Gelaye, Bizu
Denis, Marie
Tadesse, Mahlet G.
Enquobahrie, Daniel A.
Ananth, Cande V.
Pacora, Percy N.
Salazar, Manuel
Sanchez, Sixto E.
Williams, Michelle A.
dc.subject.es_PE.fl_str_mv Circadian gene
Placental abruption
Pregnancy
Pregnancy
Placentae
SNPs
topic Circadian gene
Placental abruption
Pregnancy
Pregnancy
Placentae
SNPs
description The genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA cases and 244 controls. Genotyping was performed using the Illumina Cardio-MetaboChip. We examined 116 SNPs in 13 genes known to moderate circadian rhythms. Logistic regression models were fit to estimate odds ratios (ORs). The combined effect of multiple SNPs on PA risk was estimated using a weighted genetic risk score. We examined independent and joint associations of wGRS derived from placental and maternal genomes with PA. Seven SNPs in five genes (ARNTL2, CRY2, DEC1, PER3 and RORA), in the placental genome, were associated with PA risk. Each copy of the minor allele (G) of a SNP in the RORA gene (rs2899663) was associated with a 30% reduced odds of PA (95% CI 0.52-0.95). The odds of PA increased with increasing placental-wGRS (Ptrend<0.001). The ORs were 1.00, 2.16, 3.24 and 4.48 across quartiles. Associations persisted after the maternal-wGRS was included in the model. There was evidence of an additive contribution of placental and maternal genetic contributions to PA risk. Participants with placental- and maternal-wGRS in the highest quartile, compared with those in the lowest quartile, had a 15.57-fold (95% CI 3.34- 72.60) increased odds of PA. Placental variants in circadian clock-related genes are associated with PA risk; and the association persists after control of genetic variants in the maternal genome
publishDate 2016
dc.date.accessioned.es_PE.fl_str_mv 2016-04-28T16:09:07Z
dc.date.available.es_PE.fl_str_mv 2016-04-28T16:09:07Z
dc.date.issued.fl_str_mv 2016-03
dc.type.es_PE.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.issn.es_PE.fl_str_mv 1948-1756
dc.identifier.uri.es_PE.fl_str_mv http://hdl.handle.net/10757/607302
dc.identifier.journal.es_PE.fl_str_mv International Journal of Molecular Epidemiology and Genetics (Int J Mol Epidemiol Genet)
identifier_str_mv 1948-1756
International Journal of Molecular Epidemiology and Genetics (Int J Mol Epidemiol Genet)
url http://hdl.handle.net/10757/607302
dc.language.iso.es_PE.fl_str_mv eng
language eng
dc.relation.url.es_PE.fl_str_mv http://www.ijmeg.org/IJMEG_V7N1.html
dc.rights.es_PE.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.es_PE.fl_str_mv application/pdf
dc.publisher.es_PE.fl_str_mv International Journal of Molecular Epidemiology and Genetics
dc.source.es_PE.fl_str_mv Universidad Peruana de Ciencias Aplicadas (UPC)
Repositorio Académico - UPC
dc.source.none.fl_str_mv reponame:UPC-Institucional
instname:Universidad Peruana de Ciencias Aplicadas
instacron:UPC
instname_str Universidad Peruana de Ciencias Aplicadas
instacron_str UPC
institution UPC
reponame_str UPC-Institucional
collection UPC-Institucional
bitstream.url.fl_str_mv https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/1/ijmeg0024358.pdf
https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/2/license.txt
https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/3/ijmeg0024358.pdf.txt
https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/4/ijmeg0024358.pdf.jpg
bitstream.checksum.fl_str_mv 9747a4f5ae8be733a3d97ce1090fa4ab
1ed8f33c5404431ad7aabc05080746c5
3e644cb1416a35cb199eab085605eab6
f86c4685e26f18b18c5c66b2d606637c
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
repository.name.fl_str_mv Repositorio académico upc
repository.mail.fl_str_mv upc@openrepository.com
_version_ 1837187605933850624
spelling Chunfang, QiuGelaye, BizuDenis, MarieTadesse, Mahlet G.Enquobahrie, Daniel A.Ananth, Cande V.Pacora, Percy N.Salazar, ManuelSanchez, Sixto E.Williams, Michelle A.Chun-fang.Qiu@Swedish.org2016-04-28T16:09:07Z2016-04-28T16:09:07Z2016-031948-1756http://hdl.handle.net/10757/607302International Journal of Molecular Epidemiology and Genetics (Int J Mol Epidemiol Genet)The genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA cases and 244 controls. Genotyping was performed using the Illumina Cardio-MetaboChip. We examined 116 SNPs in 13 genes known to moderate circadian rhythms. Logistic regression models were fit to estimate odds ratios (ORs). The combined effect of multiple SNPs on PA risk was estimated using a weighted genetic risk score. We examined independent and joint associations of wGRS derived from placental and maternal genomes with PA. Seven SNPs in five genes (ARNTL2, CRY2, DEC1, PER3 and RORA), in the placental genome, were associated with PA risk. Each copy of the minor allele (G) of a SNP in the RORA gene (rs2899663) was associated with a 30% reduced odds of PA (95% CI 0.52-0.95). The odds of PA increased with increasing placental-wGRS (Ptrend<0.001). The ORs were 1.00, 2.16, 3.24 and 4.48 across quartiles. Associations persisted after the maternal-wGRS was included in the model. There was evidence of an additive contribution of placental and maternal genetic contributions to PA risk. Participants with placental- and maternal-wGRS in the highest quartile, compared with those in the lowest quartile, had a 15.57-fold (95% CI 3.34- 72.60) increased odds of PA. Placental variants in circadian clock-related genes are associated with PA risk; and the association persists after control of genetic variants in the maternal genomeRevisión por paresapplication/pdfengInternational Journal of Molecular Epidemiology and Geneticshttp://www.ijmeg.org/IJMEG_V7N1.htmlinfo:eu-repo/semantics/openAccessUniversidad Peruana de Ciencias Aplicadas (UPC)Repositorio Académico - UPCreponame:UPC-Institucionalinstname:Universidad Peruana de Ciencias Aplicadasinstacron:UPCCircadian geneb4dd3699-7fc8-4771-b1dc-b4ce2062ebf2600Placental abruptionaa42db39-8547-437a-b829-0c191233f7db600Pregnancy00b8bd68-d9d8-411d-92a6-e1d8f74cba26600Pregnancy00b8bd68-d9d8-411d-92a6-e1d8f74cba26600Placentae3a18bdb9-ea23-44b4-8266-66210145ebd6600SNPsdeb5a9c5-d1a8-4381-ab51-9faeb808a0e9600Placental genetic variations in circadian clock-related genes increase the risk of placental abruptioninfo:eu-repo/semantics/article2018-06-17T18:46:16ZThe genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA cases and 244 controls. Genotyping was performed using the Illumina Cardio-MetaboChip. We examined 116 SNPs in 13 genes known to moderate circadian rhythms. Logistic regression models were fit to estimate odds ratios (ORs). The combined effect of multiple SNPs on PA risk was estimated using a weighted genetic risk score. We examined independent and joint associations of wGRS derived from placental and maternal genomes with PA. Seven SNPs in five genes (ARNTL2, CRY2, DEC1, PER3 and RORA), in the placental genome, were associated with PA risk. Each copy of the minor allele (G) of a SNP in the RORA gene (rs2899663) was associated with a 30% reduced odds of PA (95% CI 0.52-0.95). The odds of PA increased with increasing placental-wGRS (P<sub>trend</sub><0.001). The ORs were 1.00, 2.16, 3.24 and 4.48 across quartiles. Associations persisted after the maternal-wGRS was included in the model. There was evidence of an additive contribution of placental and maternal genetic contributions to PA risk. Participants with placental- and maternal-wGRS in the highest quartile, compared with those in the lowest quartile, had a 15.57-fold (95% CI 3.34- 72.60) increased odds of PA. Placental variants in circadian clock-related genes are associated with PA risk; and the association persists after control of genetic variants in the maternal genomeORIGINALijmeg0024358.pdfijmeg0024358.pdfapplication/pdf388096https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/1/ijmeg0024358.pdf9747a4f5ae8be733a3d97ce1090fa4abMD51trueLICENSElicense.txtlicense.txttext/plain; charset=utf-81659https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/2/license.txt1ed8f33c5404431ad7aabc05080746c5MD52falseTEXTijmeg0024358.pdf.txtijmeg0024358.pdf.txtExtracted Texttext/plain33827https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/3/ijmeg0024358.pdf.txt3e644cb1416a35cb199eab085605eab6MD53falseTHUMBNAILijmeg0024358.pdf.jpgijmeg0024358.pdf.jpgGenerated Thumbnailimage/jpeg121551https://repositorioacademico.upc.edu.pe/bitstream/10757/607302/4/ijmeg0024358.pdf.jpgf86c4685e26f18b18c5c66b2d606637cMD54false10757/607302oai:repositorioacademico.upc.edu.pe:10757/6073022019-08-30 07:50:34.913Repositorio académico upcupc@openrepository.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
score 13.95948
Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).