Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva
Descripción del Articulo
InfluenzaAviruses are often present in environmental and clinical samples at concentrations below the limit of detection (LOD) of molecular diagnostics. Here we report an integrated microfluidic preconcentration and nucleic amplification system (μFPNAS) which enables both preconcentration of influen...
Autores: | , , , , , , , , , , , |
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Formato: | artículo |
Fecha de Publicación: | 2020 |
Institución: | Universidad de Ingeniería y tecnología |
Repositorio: | UTEC-Institucional |
Lenguaje: | inglés |
OAI Identifier: | oai:repositorio.utec.edu.pe:20.500.12815/194 |
Enlace del recurso: | https://hdl.handle.net/20.500.12815/194 https://doi.org/10.3390/mi11020203 |
Nivel de acceso: | acceso abierto |
Materia: | Microfluidic device Immunomagnetic separation Molecular amplification H1N1 |
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Kim, YongheeAbafogi, Abdurhaman TeyibTran, Buu MinhKim, JaewonLee, JinyeopChen, ZhenzhongBae, Pan KeePark, KyoungsookShin, Yong-BeomNoort, Danny vanLee, Nae YoonPark, Sungsu2021-03-16T23:23:01Z2021-03-16T23:23:01Z2020-02-162072-666Xhttps://hdl.handle.net/20.500.12815/194https://doi.org/10.3390/mi11020203MicromachinesInfluenzaAviruses are often present in environmental and clinical samples at concentrations below the limit of detection (LOD) of molecular diagnostics. Here we report an integrated microfluidic preconcentration and nucleic amplification system (μFPNAS) which enables both preconcentration of influenza A virus H1N1 (H1N1) and amplification of its viral RNA, thereby lowering LOD for H1N1. H1N1 virus particles were first magnetically preconcentrated using magnetic nanoparticles conjugated with an antibody specific for the virus. Their isolated RNA was amplified to cDNA through thermocycling in a trapezoidal chamber of the μFPNAS. A detection limit as low as 100 TCID50 (50% tissue culture infective dose) in saliva can be obtained within 2 hours. These results suggest that the LOD of molecular diagnostics for virus can be lowered by systematically combining immunomagnetic separation and reverse transcriptase-polymerase chain reaction (RT-PCR) in one microfluidic device.application/pdfengMDPIinfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/4.0/Repositorio Institucional UTECUniversidad de Ingeniería y Tecnología - UTECreponame:UTEC-Institucionalinstname:Universidad de Ingeniería y tecnologíainstacron:UTECMicrofluidic deviceImmunomagnetic separationMolecular amplificationH1N1Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in salivainfo:eu-repo/semantics/articleORIGINAL10.3390mi11020203.pdf10.3390mi11020203.pdfapplication/pdf2400838http://repositorio.utec.edu.pe/bitstream/20.500.12815/194/1/10.3390mi11020203.pdf6d3dc83c97bc5c366948397059811406MD51open accessTEXT10.3390mi11020203.pdf.txt10.3390mi11020203.pdf.txtExtracted texttext/plain43650http://repositorio.utec.edu.pe/bitstream/20.500.12815/194/5/10.3390mi11020203.pdf.txt0d1b0a25f989611508ad331b2f44beaaMD55open accessTHUMBNAIL10.3390mi11020203.pdf.jpg10.3390mi11020203.pdf.jpgGenerated Thumbnailimage/jpeg1590http://repositorio.utec.edu.pe/bitstream/20.500.12815/194/3/10.3390mi11020203.pdf.jpg7c4038f65cb3c9607a3040c92e9fe21aMD53open access20.500.12815/194oai:repositorio.utec.edu.pe:20.500.12815/1942024-04-10 15:56:12.771open accessRepositorio Institucional UTECrepositorio@utec.edu.pe |
dc.title.es_PE.fl_str_mv |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
title |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
spellingShingle |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva Kim, Yonghee Microfluidic device Immunomagnetic separation Molecular amplification H1N1 |
title_short |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
title_full |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
title_fullStr |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
title_full_unstemmed |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
title_sort |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
author |
Kim, Yonghee |
author_facet |
Kim, Yonghee Abafogi, Abdurhaman Teyib Tran, Buu Minh Kim, Jaewon Lee, Jinyeop Chen, Zhenzhong Bae, Pan Kee Park, Kyoungsook Shin, Yong-Beom Noort, Danny van Lee, Nae Yoon Park, Sungsu |
author_role |
author |
author2 |
Abafogi, Abdurhaman Teyib Tran, Buu Minh Kim, Jaewon Lee, Jinyeop Chen, Zhenzhong Bae, Pan Kee Park, Kyoungsook Shin, Yong-Beom Noort, Danny van Lee, Nae Yoon Park, Sungsu |
author2_role |
author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Kim, Yonghee Abafogi, Abdurhaman Teyib Tran, Buu Minh Kim, Jaewon Lee, Jinyeop Chen, Zhenzhong Bae, Pan Kee Park, Kyoungsook Shin, Yong-Beom Noort, Danny van Lee, Nae Yoon Park, Sungsu |
dc.subject.es_PE.fl_str_mv |
Microfluidic device Immunomagnetic separation Molecular amplification H1N1 |
topic |
Microfluidic device Immunomagnetic separation Molecular amplification H1N1 |
description |
InfluenzaAviruses are often present in environmental and clinical samples at concentrations below the limit of detection (LOD) of molecular diagnostics. Here we report an integrated microfluidic preconcentration and nucleic amplification system (μFPNAS) which enables both preconcentration of influenza A virus H1N1 (H1N1) and amplification of its viral RNA, thereby lowering LOD for H1N1. H1N1 virus particles were first magnetically preconcentrated using magnetic nanoparticles conjugated with an antibody specific for the virus. Their isolated RNA was amplified to cDNA through thermocycling in a trapezoidal chamber of the μFPNAS. A detection limit as low as 100 TCID50 (50% tissue culture infective dose) in saliva can be obtained within 2 hours. These results suggest that the LOD of molecular diagnostics for virus can be lowered by systematically combining immunomagnetic separation and reverse transcriptase-polymerase chain reaction (RT-PCR) in one microfluidic device. |
publishDate |
2020 |
dc.date.accessioned.none.fl_str_mv |
2021-03-16T23:23:01Z |
dc.date.available.none.fl_str_mv |
2021-03-16T23:23:01Z |
dc.date.issued.fl_str_mv |
2020-02-16 |
dc.type.es_PE.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
dc.identifier.issn.es_PE.fl_str_mv |
2072-666X |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12815/194 |
dc.identifier.doi.es_PE.fl_str_mv |
https://doi.org/10.3390/mi11020203 |
dc.identifier.journal.es_PE.fl_str_mv |
Micromachines |
identifier_str_mv |
2072-666X Micromachines |
url |
https://hdl.handle.net/20.500.12815/194 https://doi.org/10.3390/mi11020203 |
dc.language.iso.es_PE.fl_str_mv |
eng |
language |
eng |
dc.rights.es_PE.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
dc.format.es_PE.fl_str_mv |
application/pdf |
dc.publisher.es_PE.fl_str_mv |
MDPI |
dc.source.es_PE.fl_str_mv |
Repositorio Institucional UTEC Universidad de Ingeniería y Tecnología - UTEC |
dc.source.none.fl_str_mv |
reponame:UTEC-Institucional instname:Universidad de Ingeniería y tecnología instacron:UTEC |
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Universidad de Ingeniería y tecnología |
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UTEC |
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UTEC |
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UTEC-Institucional |
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Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).