Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani

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Sheath blight caused by Rhizotonia solani is described as the second major disease affecting rice. Genetic resistance to R. solani the ideal control measure is hampered because of the difficulty in identifying adequate resistance sources under typical selection conditions. Proteomic analysis techniq...

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Detalles Bibliográficos
Autores: Morela Delgado, Fuchs, Fernández, Marisol, Pérez-Almeida , Iris
Formato: artículo
Fecha de Publicación:2021
Institución:Universidad Nacional Autónoma de Tayacaja Daniel Hernández Morillo
Repositorio:Tayacaja
Lenguaje:español
OAI Identifier:oai:ojs.unat.edu.pe:article/156
Enlace del recurso:https://revistas.unat.edu.pe/index.php/RevTaya/article/view/156
Nivel de acceso:acceso abierto
Materia:Arroz
Rhizoctonia solani
proteínas de resistencia
2-D PAGE
rice
resistance proteins
id REVUNAT_6a68e226bd286fb48e08c6004d0509c0
oai_identifier_str oai:ojs.unat.edu.pe:article/156
network_acronym_str REVUNAT
network_name_str Tayacaja
repository_id_str
dc.title.none.fl_str_mv Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
Detección de proteínas de arroz utilizando geles 2-D después de la inoculación con Rhizotonia solani
title Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
spellingShingle Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
Morela Delgado, Fuchs
Arroz
Rhizoctonia solani
proteínas de resistencia
2-D PAGE
rice
Rhizoctonia solani
resistance proteins
2-D PAGE
title_short Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
title_full Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
title_fullStr Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
title_full_unstemmed Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
title_sort Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solani
dc.creator.none.fl_str_mv Morela Delgado, Fuchs
Fernández, Marisol
Pérez-Almeida , Iris
author Morela Delgado, Fuchs
author_facet Morela Delgado, Fuchs
Fernández, Marisol
Pérez-Almeida , Iris
author_role author
author2 Fernández, Marisol
Pérez-Almeida , Iris
author2_role author
author
dc.subject.none.fl_str_mv Arroz
Rhizoctonia solani
proteínas de resistencia
2-D PAGE
rice
Rhizoctonia solani
resistance proteins
2-D PAGE
topic Arroz
Rhizoctonia solani
proteínas de resistencia
2-D PAGE
rice
Rhizoctonia solani
resistance proteins
2-D PAGE
description Sheath blight caused by Rhizotonia solani is described as the second major disease affecting rice. Genetic resistance to R. solani the ideal control measure is hampered because of the difficulty in identifying adequate resistance sources under typical selection conditions. Proteomic analysis techniques using two-dimensional gels (2D-PAGE) allow the study or monitoring of global changes in protein expression under normal and stress conditions. In this work, we compared rice leaves protein expression patterns of two Venezuelan varieties 12, 24 and 48 h after inoculation with R. solani. Approximately 400 and 300 protein spots stained with Sypro Ruby were reproducibly resolved across gel replicates, for PALMAR and FONAIAP-2000, respectively. Forty proteins out of a total 49 were identified for PALMAR variety, with thirty-two up-regulated protein spots and 8 down-regulated. Twenty-six proteins out of a total 33 were identified for FONAIAP-2000 variety, with seven up-regulated protein spots and 19 down-regulated. RuBisCo was the protein most identified (48% and 82% of the detected proteins for PALMAR and FONAIAP-2000, respectively). Other identified proteins showing variations were ATPase beta subunit, UDP-glucose anthocyanin 5-O-glucosyltransferase, RNA-binding protein, putative transkelotase 1, putative ferredoxin-NAPD(H) oxide-reductase, and putative 33kDa oxygen evolving protein photosystem II. Based on our results, rice response to R. solani could be described where energy is required to induce a defense and it is supplied by proteins involved in energy metabolism. According to this, proteomic could provide information and insights on the response of rice to challenge with R. solani and other pathogens.
publishDate 2021
dc.date.none.fl_str_mv 2021-05-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Artículo revisado por pares
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://revistas.unat.edu.pe/index.php/RevTaya/article/view/156
10.46908/tayacaja.v4i1.156
url https://revistas.unat.edu.pe/index.php/RevTaya/article/view/156
identifier_str_mv 10.46908/tayacaja.v4i1.156
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv https://revistas.unat.edu.pe/index.php/RevTaya/article/view/156/124
dc.rights.none.fl_str_mv Derechos de autor 2021 Fuchs Morela Delgado, Marisol Fernández, Iris Pérez-Almeida
https://creativecommons.org/licenses/by-nc/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Derechos de autor 2021 Fuchs Morela Delgado, Marisol Fernández, Iris Pérez-Almeida
https://creativecommons.org/licenses/by-nc/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Nacional Autónoma de Tayacaja Daniel Hernández Morillo
publisher.none.fl_str_mv Universidad Nacional Autónoma de Tayacaja Daniel Hernández Morillo
dc.source.none.fl_str_mv TAYACAJA; Vol. 4 No. 1 (2021): Revista de Investigación Científica Tayacaja (Enero - Junio); 100 - 113
TAYACAJA; Vol. 4 Núm. 1 (2021): Revista de Investigación Científica Tayacaja (Enero - Junio); 100 - 113
Tayacaja; Vol. 4 No. 1 (2021): Tayacaja Scientific Research Journal (January - June); 100 - 113
2617-9156
reponame:Tayacaja
instname:Universidad Nacional Autónoma de Tayacaja Daniel Hernández Morillo
instacron:UNAT
instname_str Universidad Nacional Autónoma de Tayacaja Daniel Hernández Morillo
instacron_str UNAT
institution UNAT
reponame_str Tayacaja
collection Tayacaja
repository.name.fl_str_mv
repository.mail.fl_str_mv
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spelling Screening of rice proteins using 2-d gels after inoculation with Rhizotonia solaniDetección de proteínas de arroz utilizando geles 2-D después de la inoculación con Rhizotonia solaniMorela Delgado, FuchsFernández, MarisolPérez-Almeida , IrisArrozRhizoctonia solaniproteínas de resistencia2-D PAGEriceRhizoctonia solaniresistance proteins2-D PAGESheath blight caused by Rhizotonia solani is described as the second major disease affecting rice. Genetic resistance to R. solani the ideal control measure is hampered because of the difficulty in identifying adequate resistance sources under typical selection conditions. Proteomic analysis techniques using two-dimensional gels (2D-PAGE) allow the study or monitoring of global changes in protein expression under normal and stress conditions. In this work, we compared rice leaves protein expression patterns of two Venezuelan varieties 12, 24 and 48 h after inoculation with R. solani. Approximately 400 and 300 protein spots stained with Sypro Ruby were reproducibly resolved across gel replicates, for PALMAR and FONAIAP-2000, respectively. Forty proteins out of a total 49 were identified for PALMAR variety, with thirty-two up-regulated protein spots and 8 down-regulated. Twenty-six proteins out of a total 33 were identified for FONAIAP-2000 variety, with seven up-regulated protein spots and 19 down-regulated. RuBisCo was the protein most identified (48% and 82% of the detected proteins for PALMAR and FONAIAP-2000, respectively). Other identified proteins showing variations were ATPase beta subunit, UDP-glucose anthocyanin 5-O-glucosyltransferase, RNA-binding protein, putative transkelotase 1, putative ferredoxin-NAPD(H) oxide-reductase, and putative 33kDa oxygen evolving protein photosystem II. Based on our results, rice response to R. solani could be described where energy is required to induce a defense and it is supplied by proteins involved in energy metabolism. According to this, proteomic could provide information and insights on the response of rice to challenge with R. solani and other pathogens.El tizón de la vaina causado por Rhizotonia solani se describe como la segunda enfermedad importante que afecta al arroz. La resistencia genética a R. solani, la medida de control ideal, se ve obstaculizada debido a la dificultad de identificar fuentes de resistencia adecuadas en condiciones típicas de selección. Las técnicas de análisis proteómico que utilizan geles bidimensionales (2D-PAGE) permiten el estudio o seguimiento de cambios globales en la expresión de proteínas en condiciones normales y de estrés. En este trabajo, comparamos los patrones de expresión de proteínas en hojas de arroz de dos variedades venezolanas 12, 24 y 48 h después de la inoculación con R. solani. Aproximadamente 400 y 300 manchas de proteína teñidas con Sypro Ruby se resolvieron de forma reproducible a través de réplicas de gel, para PALMAR y FONAIAP-2000, respectivamente. Se identificaron cuarenta proteínas de un total de 49 para la variedad PALMAR, con treinta y dos manchas proteicas reguladas al alza y 8 reguladas a la baja. Se identificaron 26 proteínas de un total de 33 para la variedad FONAIAP-2000, con siete manchas proteicas reguladas al alza y 19 reguladas a la baja. RuBisCo fue la proteína más identificada (48% y 82% de las proteínas detectadas para PALMAR y FONAIAP-2000, respectivamente). Otras proteínas identificadas que mostraron variaciones fueron la subunidad beta de la ATPasa, la UDP-glucosa antocianina 5-O-glucosiltransferasa, la proteína de unión al ARN, la supuesta transkelotasa 1, la supuesta ferredoxina-NAPD (H) óxido-reductasa y el supuesto fotosistema II de la proteína que evoluciona el oxígeno de 33 kDa. Con base en nuestros resultados, la respuesta del arroz a R. solani podría describirse donde se requiere energía para inducir una defensa y es suministrada por proteínas involucradas en el metabolismo energético. Según esto, proteomic podría proporcionar información y conocimientos sobre la respuesta del arroz al desafío con R. solani y otros patógenos.Universidad Nacional Autónoma de Tayacaja Daniel Hernández Morillo2021-05-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArtículo revisado por paresapplication/pdfhttps://revistas.unat.edu.pe/index.php/RevTaya/article/view/15610.46908/tayacaja.v4i1.156TAYACAJA; Vol. 4 No. 1 (2021): Revista de Investigación Científica Tayacaja (Enero - Junio); 100 - 113TAYACAJA; Vol. 4 Núm. 1 (2021): Revista de Investigación Científica Tayacaja (Enero - Junio); 100 - 113Tayacaja; Vol. 4 No. 1 (2021): Tayacaja Scientific Research Journal (January - June); 100 - 1132617-9156reponame:Tayacajainstname:Universidad Nacional Autónoma de Tayacaja Daniel Hernández Morilloinstacron:UNATspahttps://revistas.unat.edu.pe/index.php/RevTaya/article/view/156/124Derechos de autor 2021 Fuchs Morela Delgado, Marisol Fernández, Iris Pérez-Almeida https://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessoai:ojs.unat.edu.pe:article/1562023-04-11T15:12:35Z
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