An unidentified cluster of infection in the Peruvian Amazon region
Descripción del Articulo
joruiz@clinic.ub.es
| Autores: | , , , , , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2015 |
| Institución: | Universidad Peruana de Ciencias Aplicadas |
| Repositorio: | UPC-Institucional |
| Lenguaje: | inglés |
| OAI Identifier: | oai:repositorioacademico.upc.edu.pe:10757/555445 |
| Enlace del recurso: | https://doi.org/10.3855/jidc.6235 http://hdl.handle.net/10757/555445 |
| Nivel de acceso: | acceso abierto |
| Materia: | Bartonella spp. Sphingomonas; diagnosis Outbreak Perú |
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| dc.title.es_PE.fl_str_mv |
An unidentified cluster of infection in the Peruvian Amazon region |
| title |
An unidentified cluster of infection in the Peruvian Amazon region |
| spellingShingle |
An unidentified cluster of infection in the Peruvian Amazon region Cornejo Tapia, Ángela Bartonella spp. Sphingomonas; diagnosis Outbreak Perú |
| title_short |
An unidentified cluster of infection in the Peruvian Amazon region |
| title_full |
An unidentified cluster of infection in the Peruvian Amazon region |
| title_fullStr |
An unidentified cluster of infection in the Peruvian Amazon region |
| title_full_unstemmed |
An unidentified cluster of infection in the Peruvian Amazon region |
| title_sort |
An unidentified cluster of infection in the Peruvian Amazon region |
| author |
Cornejo Tapia, Ángela |
| author_facet |
Cornejo Tapia, Ángela Gomes, Cláudia Martínez Puchol, Sandra Bustamante, Pershing Pons, Maria J. Ruiz, Joaquim Del Valle Mendoza, Juana Suárez Ognio, Luis |
| author_role |
author |
| author2 |
Gomes, Cláudia Martínez Puchol, Sandra Bustamante, Pershing Pons, Maria J. Ruiz, Joaquim Del Valle Mendoza, Juana Suárez Ognio, Luis |
| author2_role |
author author author author author author author |
| dc.contributor.author.fl_str_mv |
Cornejo Tapia, Ángela Gomes, Cláudia Martínez Puchol, Sandra Bustamante, Pershing Pons, Maria J. Ruiz, Joaquim Del Valle Mendoza, Juana Suárez Ognio, Luis |
| dc.subject.es_PE.fl_str_mv |
Bartonella spp. Sphingomonas; diagnosis Outbreak Perú |
| topic |
Bartonella spp. Sphingomonas; diagnosis Outbreak Perú |
| description |
joruiz@clinic.ub.es |
| publishDate |
2015 |
| dc.date.accessioned.es_PE.fl_str_mv |
2015-05-21T17:53:46Z |
| dc.date.available.es_PE.fl_str_mv |
2015-05-21T17:53:46Z |
| dc.date.issued.fl_str_mv |
2015-05-21 |
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info:eu-repo/semantics/article |
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http://purl.org/coar/version/c_970fb48d4fbd8a1041 |
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1972-2680 |
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https://doi.org/10.3855/jidc.6235 |
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http://hdl.handle.net/10757/555445 |
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The Journal of Infection in Developing Countries (J Infect Dev Ctries.) |
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1972-2680 The Journal of Infection in Developing Countries (J Infect Dev Ctries.) |
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https://doi.org/10.3855/jidc.6235 http://hdl.handle.net/10757/555445 |
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eng |
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eng |
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http://www.jidc.org/index.php/journal/article/view/25989173/1306 |
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The Journal of Infection in Developing Countries |
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virtual::1780-1Cornejo Tapia, ÁngelaGomes, CláudiaMartínez Puchol, SandraBustamante, PershingPons, Maria J.Ruiz, JoaquimDel Valle Mendoza, JuanaSuárez Ognio, Luis2015-05-21T17:53:46Z2015-05-21T17:53:46Z2015-05-211972-2680https://doi.org/10.3855/jidc.6235http://hdl.handle.net/10757/555445The Journal of Infection in Developing Countries (J Infect Dev Ctries.)joruiz@clinic.ub.esIntroduction: Bartonella bacilliformis is the etiological agent of Carrion’s disease, which is a neglected disease linked to people in low-socioeconomic populations in Andean valleys. An outbreak of B. bacilliformis was reported in a rural area of the Peruvian Amazon region. The aim of this study was to characterize this outbreak using molecular techniques. Methodology: Fifty-three blood samples from patients diagnosed with Carrion’s disease were analyzed by molecular tools, using both a Bartonella-specific polymerase chain reaction (PCR) and an universal PCR, both based on 16S rRNA gene amplification. Additional water samples from the area were also analyzed. Results: Unexpectedly, the samples were positive only when the universal PCR was used. Although environmental contamination cannot be ruled out, the results showed that Sphingomonas faeni was the possible causative agent of this outbreak, and that water was the most feasible infection source. Conclusions: Diagnosis by clinical criteria or microscopy may lead to misdiagnosis. There is a need to include molecular tools in the routine diagnosis of febrile syndromes, including Carrion’s disease.This study was funded by the Instituto de Salud Carlos III (ISCIII, Spain) (grant number: FI12/00561, which included FEDER funds), by the Spanish Network for the Research in Infectious Diseases (REIPI RD12/0015) and Generalitat de Catalunya, Departament d’Universitats, Recerca i Societat de la Informació (2014 SGR 26) (JR) and by internal funds of the Universidad Peruana de Ciencias Aplicadas (UPC), Lima-Peru (JdV). JR has a fellowship from the program I3, of the ISCIII (grant number: CES11/012). CG has a PhD fellowship of the ISCIII (FI12/00561). MJP has a postdoctoral fellowship from CONCYTEC. We thank Donna Pringle for language and idiomatic corrections.Revisión por paresapplication/pdfengThe Journal of Infection in Developing Countrieshttp://www.jidc.org/index.php/journal/article/view/25989173/1306info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/4.0/Universidad Peruana de Ciencias Aplicadas (UPC)Repositorio Académico - UPCreponame:UPC-Institucionalinstname:Universidad Peruana de Ciencias Aplicadasinstacron:UPCBartonella spp.90f7edae-2de1-4b53-b967-825133e974d4600Sphingomonas; diagnosise2e7e8f6-f9da-4fc0-a930-14c56d09ff6b600Outbreak8d3a1582-51d7-446e-b685-682ef58b66c5600Perú3ef1f6c8-106f-4187-ac39-34c1ab530fb7600An unidentified cluster of infection in the Peruvian Amazon regioninfo:eu-repo/semantics/articlehttp://purl.org/coar/version/c_970fb48d4fbd8a10412018-06-17T09:14:29ZIntroduction: Bartonella bacilliformis is the etiological agent of Carrion’s disease, which is a neglected disease linked to people in low-socioeconomic populations in Andean valleys. An outbreak of B. bacilliformis was reported in a rural area of the Peruvian Amazon region. The aim of this study was to characterize this outbreak using molecular techniques. Methodology: Fifty-three blood samples from patients diagnosed with Carrion’s disease were analyzed by molecular tools, using both a Bartonella-specific polymerase chain reaction (PCR) and an universal PCR, both based on 16S rRNA gene amplification. Additional water samples from the area were also analyzed. Results: Unexpectedly, the samples were positive only when the universal PCR was used. Although environmental contamination cannot be ruled out, the results showed that Sphingomonas faeni was the possible causative agent of this outbreak, and that water was the most feasible infection source. Conclusions: Diagnosis by clinical criteria or microscopy may lead to misdiagnosis. There is a need to include molecular tools in the routine diagnosis of febrile syndromes, including Carrion’s disease.Publicationd0334351-f009-5af1-8402-3151456cabdfvirtual::1780-1d0334351-f009-5af1-8402-3151456cabdfvirtual::1780-1TEXTunidentifiedcluster.pdf.txtunidentifiedcluster.pdf.txtExtracted Texttext/plain21463https://upc.dspace7.openrepository.com/bitstreams/cab92ce1-91a7-54c6-9af4-565ec97a7fae/download6d078516ea9a334dc83ef822b5d90edaMD56THUMBNAILunidentifiedcluster.pdf.jpgunidentifiedcluster.pdf.jpgGenerated Thumbnailimage/jpeg122577https://upc.dspace7.openrepository.com/bitstreams/d9c4bb82-08bd-559a-ace5-3047a30b6119/download0bfeae677045d9bfaf6bacd098229942MD57ORIGINALunidentifiedcluster.pdfunidentifiedcluster.pdfapplication/pdf351370https://upc.dspace7.openrepository.com/bitstreams/62092e1a-b8ab-5159-85a9-d599a411048a/downloadf802f8a65c4bfcf5ac7fc344260b815cMD51CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849https://upc.dspace7.openrepository.com/bitstreams/e6d639dd-a660-5850-b45e-b9d1c0153ba4/download4afdbb8c545fd630ea7db775da747b2fMD52license_textlicense_texttext/html; charset=utf-818695https://upc.dspace7.openrepository.com/bitstreams/ef4384d5-ba99-5d93-bb93-3809d312509b/download706fa86f01594bbd4ec888ac35076615MD53license_rdflicense_rdfapplication/rdf+xml; charset=utf-823148https://upc.dspace7.openrepository.com/bitstreams/13d947fa-26b1-5f31-af70-1a1c97fe7fd2/download9da0b6dfac957114c6a7714714b86306MD54LICENSElicense.txtlicense.txttext/plain; charset=utf-81659https://upc.dspace7.openrepository.com/bitstreams/5767e05f-793a-5e6a-80a1-b1a63e07ed2f/download1ed8f33c5404431ad7aabc05080746c5MD5510757/555445oai:upc.dspace7.openrepository.com:10757/5554452026-05-08 06:28:45.401https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessopen.accesshttps://upc.dspace7.openrepository.comRepositorio académico upcrepositorioacademico@upc.edu.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 |
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Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).