Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach

Descripción del Articulo

Carrion's disease, caused by the bacterium Bartonella bacilliformis, is a serious public health problem in Peru, Ecuador and Colombia. Currently there is no available vaccine against B. bacilliformis. While antibiotics are the standard treatment, resistant strains have been reported, and there...

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Detalles Bibliográficos
Autores: Rivera-Asencios, Damaris, Espinoza-Culupú, Abraham, Carmen-Sifuentes, Sheyla, Ramirez, Pablo, García-de-la-Guarda, Ruth
Formato: artículo
Fecha de Publicación:2024
Institución:Universidad Nacional Mayor de San Marcos
Repositorio:UNMSM-Tesis
Lenguaje:inglés
OAI Identifier:oai:cybertesis.unmsm.edu.pe:20.500.12672/27424
Enlace del recurso:https://hdl.handle.net/20.500.12672/27424
https://doi.org/10.1016/j.compbiomed.2024.109397
Nivel de acceso:acceso abierto
Materia:Multiepítopo
Vacuna
Inmunoinformática
Bartonella bacilliformis
https://purl.org/pe-repo/ocde/ford#1.06.03
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dc.title.none.fl_str_mv Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
title Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
spellingShingle Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
Rivera-Asencios, Damaris
Multiepítopo
Vacuna
Inmunoinformática
Bartonella bacilliformis
https://purl.org/pe-repo/ocde/ford#1.06.03
title_short Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
title_full Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
title_fullStr Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
title_full_unstemmed Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
title_sort Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
author Rivera-Asencios, Damaris
author_facet Rivera-Asencios, Damaris
Espinoza-Culupú, Abraham
Carmen-Sifuentes, Sheyla
Ramirez, Pablo
García-de-la-Guarda, Ruth
author_role author
author2 Espinoza-Culupú, Abraham
Carmen-Sifuentes, Sheyla
Ramirez, Pablo
García-de-la-Guarda, Ruth
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Rivera-Asencios, Damaris
Espinoza-Culupú, Abraham
Carmen-Sifuentes, Sheyla
Ramirez, Pablo
García-de-la-Guarda, Ruth
dc.subject.none.fl_str_mv Multiepítopo
Vacuna
Inmunoinformática
Bartonella bacilliformis
topic Multiepítopo
Vacuna
Inmunoinformática
Bartonella bacilliformis
https://purl.org/pe-repo/ocde/ford#1.06.03
dc.subject.ocde.none.fl_str_mv https://purl.org/pe-repo/ocde/ford#1.06.03
description Carrion's disease, caused by the bacterium Bartonella bacilliformis, is a serious public health problem in Peru, Ecuador and Colombia. Currently there is no available vaccine against B. bacilliformis. While antibiotics are the standard treatment, resistant strains have been reported, and there is a potential spread of the vector that transmits the bacteria. This study aimed to design a multi-epitope vaccine candidate against the causative agent of Carrion's disease using immunoinformatics tools. Predictions of B-cell epitopes, as well as CD4+ and CD8+T cell epitopes, were performed from the entire proteome of B. bacilliformis KC583 using the most frequent alleles from Peru, Ecuador, Colombia, and worldwide. B-cell epitopes and T-cell nested epitopes from outer membrane and virulence-associated proteins were selected. Epitopes were filtered out based on promiscuity, non-allergenicity, conservation, non-homology and non-toxicity. Two vaccine constructs were assembled using linkers. The tertiary structure of the constructs was predicted, and their stability was evaluated through molecular dynamics simulations. The most stable construct was selected for molecular docking with the TLR4 receptor. This study proposes a vaccine construct evaluated in silico as a potential vaccine candidate against Bartonella bacilliformis.
publishDate 2024
dc.date.accessioned.none.fl_str_mv 2025-09-19T14:34:22Z
dc.date.available.none.fl_str_mv 2025-09-19T14:34:22Z
dc.date.issued.fl_str_mv 2024-11-20
dc.type.none.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.citation.none.fl_str_mv Rivera-Asencios, D., Espinoza-Culupú, A., Carmen-Sifuentes, S., Ramirez, P., & García-de-la-Guarda, R. (2025). Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach. Computers in Biology and Medicine, 184, 109397. https://doi.org/10.1016/j.compbiomed.2024.109397
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12672/27424
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.compbiomed.2024.109397
identifier_str_mv Rivera-Asencios, D., Espinoza-Culupú, A., Carmen-Sifuentes, S., Ramirez, P., & García-de-la-Guarda, R. (2025). Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach. Computers in Biology and Medicine, 184, 109397. https://doi.org/10.1016/j.compbiomed.2024.109397
url https://hdl.handle.net/20.500.12672/27424
https://doi.org/10.1016/j.compbiomed.2024.109397
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.none.fl_str_mv Vol. 184
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dc.publisher.none.fl_str_mv Computers in Biology and Medicine
publisher.none.fl_str_mv Computers in Biology and Medicine
dc.source.none.fl_str_mv reponame:UNMSM-Tesis
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spelling Rivera-Asencios, DamarisEspinoza-Culupú, AbrahamCarmen-Sifuentes, SheylaRamirez, PabloGarcía-de-la-Guarda, Ruth2025-09-19T14:34:22Z2025-09-19T14:34:22Z2024-11-20Rivera-Asencios, D., Espinoza-Culupú, A., Carmen-Sifuentes, S., Ramirez, P., & García-de-la-Guarda, R. (2025). Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach. Computers in Biology and Medicine, 184, 109397. https://doi.org/10.1016/j.compbiomed.2024.109397https://hdl.handle.net/20.500.12672/27424https://doi.org/10.1016/j.compbiomed.2024.109397Carrion's disease, caused by the bacterium Bartonella bacilliformis, is a serious public health problem in Peru, Ecuador and Colombia. Currently there is no available vaccine against B. bacilliformis. While antibiotics are the standard treatment, resistant strains have been reported, and there is a potential spread of the vector that transmits the bacteria. This study aimed to design a multi-epitope vaccine candidate against the causative agent of Carrion's disease using immunoinformatics tools. Predictions of B-cell epitopes, as well as CD4+ and CD8+T cell epitopes, were performed from the entire proteome of B. bacilliformis KC583 using the most frequent alleles from Peru, Ecuador, Colombia, and worldwide. B-cell epitopes and T-cell nested epitopes from outer membrane and virulence-associated proteins were selected. Epitopes were filtered out based on promiscuity, non-allergenicity, conservation, non-homology and non-toxicity. Two vaccine constructs were assembled using linkers. The tertiary structure of the constructs was predicted, and their stability was evaluated through molecular dynamics simulations. The most stable construct was selected for molecular docking with the TLR4 receptor. This study proposes a vaccine construct evaluated in silico as a potential vaccine candidate against Bartonella bacilliformis.Perú. Universidad Nacional Mayor de San Marcos. Vicerrectorado de Investigación y Posgrado. Programa de Promoción de Trabajo de Investigación para optar al grado académico de Bachiller. 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