Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers

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The Asblack sheep is the cross of Assaf and Blackbelly to obtain a composite breed. The aim of this study was to determine the genetic diversity of the Asblack and its relationship with the parental breeds. Blood samples were taken from 103 unrelated sheep from the Lima, Peru region. Sheep samples w...

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Detalles Bibliográficos
Autores: Morón Barraza, Jonathan Alejandro, Yalta, C., Gutiérrez, G., Veli, E.
Formato: artículo
Fecha de Publicación:2020
Institución:Universidad Nacional Mayor de San Marcos
Repositorio:Revistas - Universidad Nacional Mayor de San Marcos
Lenguaje:español
OAI Identifier:oai:ojs.csi.unmsm:article/14733
Enlace del recurso:https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733
Nivel de acceso:acceso abierto
Materia:sheep
microsatellites
genetic diversity
population structure
ovinos
microsatélites
diversidad genética
estructura poblacional
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network_acronym_str REVUNMSM
network_name_str Revistas - Universidad Nacional Mayor de San Marcos
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dc.title.none.fl_str_mv Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
Diversidad genética en ovinos (Ovis aries) Asblack de Lima, Perú, utilizando marcadores microsatélites
title Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
spellingShingle Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
Morón Barraza, Jonathan Alejandro
sheep
microsatellites
genetic diversity
population structure
ovinos
microsatélites
diversidad genética
estructura poblacional
title_short Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
title_full Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
title_fullStr Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
title_full_unstemmed Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
title_sort Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
dc.creator.none.fl_str_mv Morón Barraza, Jonathan Alejandro
Yalta, C.
Gutiérrez, G.
Veli, E.
author Morón Barraza, Jonathan Alejandro
author_facet Morón Barraza, Jonathan Alejandro
Yalta, C.
Gutiérrez, G.
Veli, E.
author_role author
author2 Yalta, C.
Gutiérrez, G.
Veli, E.
author2_role author
author
author
dc.subject.none.fl_str_mv sheep
microsatellites
genetic diversity
population structure
ovinos
microsatélites
diversidad genética
estructura poblacional
topic sheep
microsatellites
genetic diversity
population structure
ovinos
microsatélites
diversidad genética
estructura poblacional
description The Asblack sheep is the cross of Assaf and Blackbelly to obtain a composite breed. The aim of this study was to determine the genetic diversity of the Asblack and its relationship with the parental breeds. Blood samples were taken from 103 unrelated sheep from the Lima, Peru region. Sheep samples were genotyped for 17 microsatellite markers. High diversity was found in the populations and a total of 146 alleles were detected. Asblack had the highest number of alleles. The expected heterozygosity was greater than the observed in Asblack sheep with regards to Assaf and Blackbelly which indicates a trend for a deficit of heterozygotes in the cross. In addition, nine loci were not in Hardy-Weinberg equilibrium, under the null hypothesis of random union of gametes in the cross. The molecular variation among the populations was 11.4% and the variation among individuals within the populations was 6.81% of the total; however, when analyzing the population structure, the genetic flow was 0.03, which indicates a lower genetic differentiation. The values ​​of FIS (0.077) reflected low levels of inbreeding, and FST (0.115) indicates a moderate genetic differentiation. On the other hand, the populations were separated in the three clusters (K​=3), a result supported by the factorial correspondence analysis. In conclusion, a high genetic diversity was found in the populations studied by breed and individuals, with a moderate differentiation of Asblack sheep with its parental breeds.
publishDate 2020
dc.date.none.fl_str_mv 2020-02-04
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733
10.15381/rivep.v30i4.14733
url https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733
identifier_str_mv 10.15381/rivep.v30i4.14733
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733/14613
dc.rights.none.fl_str_mv Derechos de autor 2020 Jonathan Alejandro Morón Barraza, C. Yalta, G. Gutiérrez, E. Veli
https://creativecommons.org/licenses/by-nc-sa/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Derechos de autor 2020 Jonathan Alejandro Morón Barraza, C. Yalta, G. Gutiérrez, E. Veli
https://creativecommons.org/licenses/by-nc-sa/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
dc.source.none.fl_str_mv Revista de Investigaciones Veterinarias del Perú; Vol. 30 Núm. 4 (2019); 1552-1561
Revista de Investigaciones Veterinarias del Perú; Vol. 30 No. 4 (2019); 1552-1561
1682-3419
1609-9117
reponame:Revistas - Universidad Nacional Mayor de San Marcos
instname:Universidad Nacional Mayor de San Marcos
instacron:UNMSM
instname_str Universidad Nacional Mayor de San Marcos
instacron_str UNMSM
institution UNMSM
reponame_str Revistas - Universidad Nacional Mayor de San Marcos
collection Revistas - Universidad Nacional Mayor de San Marcos
repository.name.fl_str_mv
repository.mail.fl_str_mv
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spelling Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markersDiversidad genética en ovinos (Ovis aries) Asblack de Lima, Perú, utilizando marcadores microsatélitesMorón Barraza, Jonathan AlejandroYalta, C.Gutiérrez, G.Veli, E.sheepmicrosatellitesgenetic diversitypopulation structureovinosmicrosatélitesdiversidad genéticaestructura poblacionalThe Asblack sheep is the cross of Assaf and Blackbelly to obtain a composite breed. The aim of this study was to determine the genetic diversity of the Asblack and its relationship with the parental breeds. Blood samples were taken from 103 unrelated sheep from the Lima, Peru region. Sheep samples were genotyped for 17 microsatellite markers. High diversity was found in the populations and a total of 146 alleles were detected. Asblack had the highest number of alleles. The expected heterozygosity was greater than the observed in Asblack sheep with regards to Assaf and Blackbelly which indicates a trend for a deficit of heterozygotes in the cross. In addition, nine loci were not in Hardy-Weinberg equilibrium, under the null hypothesis of random union of gametes in the cross. The molecular variation among the populations was 11.4% and the variation among individuals within the populations was 6.81% of the total; however, when analyzing the population structure, the genetic flow was 0.03, which indicates a lower genetic differentiation. The values ​​of FIS (0.077) reflected low levels of inbreeding, and FST (0.115) indicates a moderate genetic differentiation. On the other hand, the populations were separated in the three clusters (K​=3), a result supported by the factorial correspondence analysis. In conclusion, a high genetic diversity was found in the populations studied by breed and individuals, with a moderate differentiation of Asblack sheep with its parental breeds.El ovino Asblack es el resultado del cruce de los ovinos Assaf y Blackbelly con fines de formar una raza sintética. El objetivo del estudio fue analizar la diversidad genética de los ovinos Asblack y su relación con los ovinos Assaf y Blackbelly. Se colectaron muestras de sangre a 103 ovinos no emparentados de la región Lima, Perú. Los ovinos fueron genotipados para 17 marcadores microsatélites. Se halló una alta diversidad en las poblaciones, identificándose un total de 146 alelos, donde la población de ovinos Asblack tuvo el mayor número de alelos. La heterocigosidad esperada fue mayor a la observada en los ovinos Asblack con respecto al ovino Assaf y Blackbelly, lo que indica una tendencia al déficit de heterocigotos en el cruce. Además, se observó nueve locus que no están en equilibrio de Hardy-Weinberg, bajo la hipótesis nula de unión aleatoria de gametos en el cruce Asblack. La variación molecular entre las poblaciones fue 11.4% y la variación entre individuos dentro de las poblaciones fue de 6.8%; sin embargo, al analizar la estructura poblacional, el flujo genético fue de 0.03, lo que indica una diferenciación genética. Los valores de FIS (0.077) reflejaron bajo niveles de endogamia y el FST (0,115) indicó una moderada diferenciación genética entre las poblaciones. Las poblaciones se separaron en tres grupos (K=3), resultado soportado por el análisis factorial de correspondencia. En conclusión, se evidencia una alta diversidad genética en las poblaciones estudiadas por raza e individuos, con una moderada diferenciación de ovinos Asblack con respecto a sus razas progenitoras.Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria2020-02-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/1473310.15381/rivep.v30i4.14733Revista de Investigaciones Veterinarias del Perú; Vol. 30 Núm. 4 (2019); 1552-1561Revista de Investigaciones Veterinarias del Perú; Vol. 30 No. 4 (2019); 1552-15611682-34191609-9117reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733/14613Derechos de autor 2020 Jonathan Alejandro Morón Barraza, C. Yalta, G. Gutiérrez, E. Velihttps://creativecommons.org/licenses/by-nc-sa/4.0info:eu-repo/semantics/openAccessoai:ojs.csi.unmsm:article/147332020-03-17T17:09:17Z
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