Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers
Descripción del Articulo
The Asblack sheep is the cross of Assaf and Blackbelly to obtain a composite breed. The aim of this study was to determine the genetic diversity of the Asblack and its relationship with the parental breeds. Blood samples were taken from 103 unrelated sheep from the Lima, Peru region. Sheep samples w...
| Autores: | , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2020 |
| Institución: | Universidad Nacional Mayor de San Marcos |
| Repositorio: | Revistas - Universidad Nacional Mayor de San Marcos |
| Lenguaje: | español |
| OAI Identifier: | oai:ojs.csi.unmsm:article/14733 |
| Enlace del recurso: | https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733 |
| Nivel de acceso: | acceso abierto |
| Materia: | sheep microsatellites genetic diversity population structure ovinos microsatélites diversidad genética estructura poblacional |
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Revistas - Universidad Nacional Mayor de San Marcos |
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Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers Diversidad genética en ovinos (Ovis aries) Asblack de Lima, Perú, utilizando marcadores microsatélites |
| title |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers |
| spellingShingle |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers Morón Barraza, Jonathan Alejandro sheep microsatellites genetic diversity population structure ovinos microsatélites diversidad genética estructura poblacional |
| title_short |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers |
| title_full |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers |
| title_fullStr |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers |
| title_full_unstemmed |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers |
| title_sort |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markers |
| dc.creator.none.fl_str_mv |
Morón Barraza, Jonathan Alejandro Yalta, C. Gutiérrez, G. Veli, E. |
| author |
Morón Barraza, Jonathan Alejandro |
| author_facet |
Morón Barraza, Jonathan Alejandro Yalta, C. Gutiérrez, G. Veli, E. |
| author_role |
author |
| author2 |
Yalta, C. Gutiérrez, G. Veli, E. |
| author2_role |
author author author |
| dc.subject.none.fl_str_mv |
sheep microsatellites genetic diversity population structure ovinos microsatélites diversidad genética estructura poblacional |
| topic |
sheep microsatellites genetic diversity population structure ovinos microsatélites diversidad genética estructura poblacional |
| description |
The Asblack sheep is the cross of Assaf and Blackbelly to obtain a composite breed. The aim of this study was to determine the genetic diversity of the Asblack and its relationship with the parental breeds. Blood samples were taken from 103 unrelated sheep from the Lima, Peru region. Sheep samples were genotyped for 17 microsatellite markers. High diversity was found in the populations and a total of 146 alleles were detected. Asblack had the highest number of alleles. The expected heterozygosity was greater than the observed in Asblack sheep with regards to Assaf and Blackbelly which indicates a trend for a deficit of heterozygotes in the cross. In addition, nine loci were not in Hardy-Weinberg equilibrium, under the null hypothesis of random union of gametes in the cross. The molecular variation among the populations was 11.4% and the variation among individuals within the populations was 6.81% of the total; however, when analyzing the population structure, the genetic flow was 0.03, which indicates a lower genetic differentiation. The values of FIS (0.077) reflected low levels of inbreeding, and FST (0.115) indicates a moderate genetic differentiation. On the other hand, the populations were separated in the three clusters (K=3), a result supported by the factorial correspondence analysis. In conclusion, a high genetic diversity was found in the populations studied by breed and individuals, with a moderate differentiation of Asblack sheep with its parental breeds. |
| publishDate |
2020 |
| dc.date.none.fl_str_mv |
2020-02-04 |
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info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
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article |
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publishedVersion |
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https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733 10.15381/rivep.v30i4.14733 |
| url |
https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733 |
| identifier_str_mv |
10.15381/rivep.v30i4.14733 |
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spa |
| language |
spa |
| dc.relation.none.fl_str_mv |
https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733/14613 |
| dc.rights.none.fl_str_mv |
Derechos de autor 2020 Jonathan Alejandro Morón Barraza, C. Yalta, G. Gutiérrez, E. Veli https://creativecommons.org/licenses/by-nc-sa/4.0 info:eu-repo/semantics/openAccess |
| rights_invalid_str_mv |
Derechos de autor 2020 Jonathan Alejandro Morón Barraza, C. Yalta, G. Gutiérrez, E. Veli https://creativecommons.org/licenses/by-nc-sa/4.0 |
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openAccess |
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application/pdf |
| dc.publisher.none.fl_str_mv |
Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria |
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Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria |
| dc.source.none.fl_str_mv |
Revista de Investigaciones Veterinarias del Perú; Vol. 30 Núm. 4 (2019); 1552-1561 Revista de Investigaciones Veterinarias del Perú; Vol. 30 No. 4 (2019); 1552-1561 1682-3419 1609-9117 reponame:Revistas - Universidad Nacional Mayor de San Marcos instname:Universidad Nacional Mayor de San Marcos instacron:UNMSM |
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Universidad Nacional Mayor de San Marcos |
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UNMSM |
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UNMSM |
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Revistas - Universidad Nacional Mayor de San Marcos |
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Revistas - Universidad Nacional Mayor de San Marcos |
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1795238229523300352 |
| spelling |
Genetic diversity in Asblack sheep (Ovis aries) of Lima, Peru by microsatellite markersDiversidad genética en ovinos (Ovis aries) Asblack de Lima, Perú, utilizando marcadores microsatélitesMorón Barraza, Jonathan AlejandroYalta, C.Gutiérrez, G.Veli, E.sheepmicrosatellitesgenetic diversitypopulation structureovinosmicrosatélitesdiversidad genéticaestructura poblacionalThe Asblack sheep is the cross of Assaf and Blackbelly to obtain a composite breed. The aim of this study was to determine the genetic diversity of the Asblack and its relationship with the parental breeds. Blood samples were taken from 103 unrelated sheep from the Lima, Peru region. Sheep samples were genotyped for 17 microsatellite markers. High diversity was found in the populations and a total of 146 alleles were detected. Asblack had the highest number of alleles. The expected heterozygosity was greater than the observed in Asblack sheep with regards to Assaf and Blackbelly which indicates a trend for a deficit of heterozygotes in the cross. In addition, nine loci were not in Hardy-Weinberg equilibrium, under the null hypothesis of random union of gametes in the cross. The molecular variation among the populations was 11.4% and the variation among individuals within the populations was 6.81% of the total; however, when analyzing the population structure, the genetic flow was 0.03, which indicates a lower genetic differentiation. The values of FIS (0.077) reflected low levels of inbreeding, and FST (0.115) indicates a moderate genetic differentiation. On the other hand, the populations were separated in the three clusters (K=3), a result supported by the factorial correspondence analysis. In conclusion, a high genetic diversity was found in the populations studied by breed and individuals, with a moderate differentiation of Asblack sheep with its parental breeds.El ovino Asblack es el resultado del cruce de los ovinos Assaf y Blackbelly con fines de formar una raza sintética. El objetivo del estudio fue analizar la diversidad genética de los ovinos Asblack y su relación con los ovinos Assaf y Blackbelly. Se colectaron muestras de sangre a 103 ovinos no emparentados de la región Lima, Perú. Los ovinos fueron genotipados para 17 marcadores microsatélites. Se halló una alta diversidad en las poblaciones, identificándose un total de 146 alelos, donde la población de ovinos Asblack tuvo el mayor número de alelos. La heterocigosidad esperada fue mayor a la observada en los ovinos Asblack con respecto al ovino Assaf y Blackbelly, lo que indica una tendencia al déficit de heterocigotos en el cruce. Además, se observó nueve locus que no están en equilibrio de Hardy-Weinberg, bajo la hipótesis nula de unión aleatoria de gametos en el cruce Asblack. La variación molecular entre las poblaciones fue 11.4% y la variación entre individuos dentro de las poblaciones fue de 6.8%; sin embargo, al analizar la estructura poblacional, el flujo genético fue de 0.03, lo que indica una diferenciación genética. Los valores de FIS (0.077) reflejaron bajo niveles de endogamia y el FST (0,115) indicó una moderada diferenciación genética entre las poblaciones. Las poblaciones se separaron en tres grupos (K=3), resultado soportado por el análisis factorial de correspondencia. En conclusión, se evidencia una alta diversidad genética en las poblaciones estudiadas por raza e individuos, con una moderada diferenciación de ovinos Asblack con respecto a sus razas progenitoras.Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria2020-02-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/1473310.15381/rivep.v30i4.14733Revista de Investigaciones Veterinarias del Perú; Vol. 30 Núm. 4 (2019); 1552-1561Revista de Investigaciones Veterinarias del Perú; Vol. 30 No. 4 (2019); 1552-15611682-34191609-9117reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/14733/14613Derechos de autor 2020 Jonathan Alejandro Morón Barraza, C. Yalta, G. Gutiérrez, E. Velihttps://creativecommons.org/licenses/by-nc-sa/4.0info:eu-repo/semantics/openAccessoai:ojs.csi.unmsm:article/147332020-03-17T17:09:17Z |
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13.932913 |
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La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).