Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae

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Saccharomyces cerevisiae yeast serves as a nutritional supplement and food additive that may offer highly bioavailable iron. Several studies have demonstrated the viability of using iron-chelating oligopeptides to treat anaemia, suggesting that their production in yeast cells could advantageously pr...

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Detalles Bibliográficos
Autores: Canales , Pamela E., Badillo, Alondra I., Kitazono, Ana A.
Formato: artículo
Fecha de Publicación:2024
Institución:Universidad Nacional Mayor de San Marcos
Repositorio:Revistas - Universidad Nacional Mayor de San Marcos
Lenguaje:español
OAI Identifier:oai:revistasinvestigacion.unmsm.edu.pe:article/27218
Enlace del recurso:https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/27218
Nivel de acceso:acceso abierto
Materia:Yeast
random plasmid library
random peptides
iron-binding peptides
Levadura
Biblioteca de plásmidos semi-aleatorios
péptidos semi-aleatorios
péptidos quelantes de hierro
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network_acronym_str REVUNMSM
network_name_str Revistas - Universidad Nacional Mayor de San Marcos
repository_id_str
dc.title.none.fl_str_mv Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
Construcción de plásmidos mediante clonación in vivo para la búsqueda y caracterización de oligopéptidos quelantes de hierro en Saccharomyces cerevisiae
title Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
spellingShingle Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
Canales , Pamela E.
Yeast
random plasmid library
random peptides
iron-binding peptides
Levadura
Biblioteca de plásmidos semi-aleatorios
péptidos semi-aleatorios
péptidos quelantes de hierro
title_short Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
title_full Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
title_fullStr Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
title_full_unstemmed Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
title_sort Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiae
dc.creator.none.fl_str_mv Canales , Pamela E.
Badillo, Alondra I.
Kitazono, Ana A.
Canales , Pamela E.
Badillo, Alondra I.
Kitazono, Ana A.
author Canales , Pamela E.
author_facet Canales , Pamela E.
Badillo, Alondra I.
Kitazono, Ana A.
author_role author
author2 Badillo, Alondra I.
Kitazono, Ana A.
author2_role author
author
dc.subject.none.fl_str_mv Yeast
random plasmid library
random peptides
iron-binding peptides
Levadura
Biblioteca de plásmidos semi-aleatorios
péptidos semi-aleatorios
péptidos quelantes de hierro
topic Yeast
random plasmid library
random peptides
iron-binding peptides
Levadura
Biblioteca de plásmidos semi-aleatorios
péptidos semi-aleatorios
péptidos quelantes de hierro
description Saccharomyces cerevisiae yeast serves as a nutritional supplement and food additive that may offer highly bioavailable iron. Several studies have demonstrated the viability of using iron-chelating oligopeptides to treat anaemia, suggesting that their production in yeast cells could advantageously provide an easy-to-use supplement. In this study, an in vivo cloning strategy was optimized to construct a semi-random plasmid library that enables the production of oligopeptides with six repetitions of Asp/Glu-Asp/Glu-Leu sequences. In these sequences, the first and second positions can include either aspartate or glutamate residues, while the third is always leucine. Additionally, several plasmids were constructed to allow the study of variants of the Arg-Glu-Glu oligopeptide, previously reported as an iron chelator. In each case, the required plasmid constructions were performed using an in vivo cloning strategy in S. cerevisiae, based on gap repair by homologous recombination. The procedure involves the co-transformation of yeast cells with the linearized plasmid and the fragment to be cloned, both with homologous flanking sequences. The resulting transformants harbor the correctly assembled plasmids and begin expressing the cloned genes, thereby enabling immediate analysis of the synthesized oligopeptides with known or semi-random sequences.
publishDate 2024
dc.date.none.fl_str_mv 2024-07-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/27218
10.15381/rpb.v31i2.27218
url https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/27218
identifier_str_mv 10.15381/rpb.v31i2.27218
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/27218/21075
dc.rights.none.fl_str_mv Derechos de autor 2024 Pamela E. Canales , Alondra I. Badillo, Ana A. Kitazono
https://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Derechos de autor 2024 Pamela E. Canales , Alondra I. Badillo, Ana A. Kitazono
https://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Ciencias Biológicas
publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Ciencias Biológicas
dc.source.none.fl_str_mv Revista Peruana de Biología; Vol. 31 No. 2 (2024); e27218
Revista Peruana de Biología; Vol. 31 Núm. 2 (2024); e27218
1727-9933
1561-0837
reponame:Revistas - Universidad Nacional Mayor de San Marcos
instname:Universidad Nacional Mayor de San Marcos
instacron:UNMSM
instname_str Universidad Nacional Mayor de San Marcos
instacron_str UNMSM
institution UNMSM
reponame_str Revistas - Universidad Nacional Mayor de San Marcos
collection Revistas - Universidad Nacional Mayor de San Marcos
repository.name.fl_str_mv
repository.mail.fl_str_mv
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spelling Plasmid construction via in vivo cloning for the search and characterization of iron-binding oligopeptides in Saccharomyces cerevisiaeConstrucción de plásmidos mediante clonación in vivo para la búsqueda y caracterización de oligopéptidos quelantes de hierro en Saccharomyces cerevisiaeCanales , Pamela E.Badillo, Alondra I.Kitazono, Ana A.Canales , Pamela E.Badillo, Alondra I.Kitazono, Ana A.Yeastrandom plasmid libraryrandom peptidesiron-binding peptidesLevaduraBiblioteca de plásmidos semi-aleatoriospéptidos semi-aleatoriospéptidos quelantes de hierroSaccharomyces cerevisiae yeast serves as a nutritional supplement and food additive that may offer highly bioavailable iron. Several studies have demonstrated the viability of using iron-chelating oligopeptides to treat anaemia, suggesting that their production in yeast cells could advantageously provide an easy-to-use supplement. In this study, an in vivo cloning strategy was optimized to construct a semi-random plasmid library that enables the production of oligopeptides with six repetitions of Asp/Glu-Asp/Glu-Leu sequences. In these sequences, the first and second positions can include either aspartate or glutamate residues, while the third is always leucine. Additionally, several plasmids were constructed to allow the study of variants of the Arg-Glu-Glu oligopeptide, previously reported as an iron chelator. In each case, the required plasmid constructions were performed using an in vivo cloning strategy in S. cerevisiae, based on gap repair by homologous recombination. The procedure involves the co-transformation of yeast cells with the linearized plasmid and the fragment to be cloned, both with homologous flanking sequences. The resulting transformants harbor the correctly assembled plasmids and begin expressing the cloned genes, thereby enabling immediate analysis of the synthesized oligopeptides with known or semi-random sequences.La levadura Saccharomyces cerevisiae es un suplemento nutricional y aditivo alimentario que podría aportar hierro de alta biodisponibilidad. Asimismo, varios estudios han demostrado la viabilidad del uso de oligopéptidos quelantes de hierro para tratar la anemia y por tanto, su producción en células de levadura podría proporcionar ventajosamente un suplemento fácil de usar. En este estudio, se optimizó una estrategia de clonación in vivo para construir una biblioteca de plásmidos semialeatoria que permite la producción de oligopéptidos con seis repeticiones de secuencias Asp/Glu-Asp/Glu-Leu. En éstos, la primera y segunda posición podrían incluir residuos de aspartato o glutamato, mientras que la tercera es siempre leucina. Adicionalmente, varios plásmidos fueron construidos para permitir el estudio de variantes del oligopéptido Arg-Glu-Glu, previamente reportado como quelante de hierro. En cada caso, las construcciones de los plásmidos requeridos se realizaron mediante la estrategia de clonación in vivo en la levadura S. cerevisiae, que se basa en la reparación de brechas en el ADN por recombinación homóloga. El procedimiento implica la cotransformación de células de levadura con el plásmido linealizado y el fragmento a clonar, ambos con secuencias flanqueantes homólogas. Los transformantes resultantes albergan a los plásmidos correctamente ensamblados y comienzan a expresar los genes clonados, permitiendo así el análisis inmediato de los oligopéptidos sintetizados de secuencias conocidas o semialeatorias. Universidad Nacional Mayor de San Marcos, Facultad de Ciencias Biológicas2024-07-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/2721810.15381/rpb.v31i2.27218Revista Peruana de Biología; Vol. 31 No. 2 (2024); e27218Revista Peruana de Biología; Vol. 31 Núm. 2 (2024); e272181727-99331561-0837reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/rpb/article/view/27218/21075Derechos de autor 2024 Pamela E. Canales , Alondra I. Badillo, Ana A. Kitazonohttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessoai:revistasinvestigacion.unmsm.edu.pe:article/272182024-07-02T18:23:30Z
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