Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour

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The aim of this study was to evaluate the genetic diversity of populations of domestic pigeons (Columba livia) in Lorica, Colombia using genes that encode plumage color. Random sampling were made in six colonies between November and December 2015. Through urban excursions, direct observation and pho...

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Detalles Bibliográficos
Autores: Causil Vargas, Luis Alfonso, Rodríguez De La Barrera, Adrián, Causil Vargas, Orlando
Formato: artículo
Fecha de Publicación:2016
Institución:Universidad Nacional Mayor de San Marcos
Repositorio:Revistas - Universidad Nacional Mayor de San Marcos
Lenguaje:español
OAI Identifier:oai:ojs.csi.unmsm:article/11476
Enlace del recurso:https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476
Nivel de acceso:acceso abierto
Materia:allele frequencies
genetic diversity
gene flow
Hardy-Weinberg equilibrium
frecuencias alélicas
diversidad genética
flujo génico
equilibrio Hardy-Weinberg
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spelling Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colourDiversidad Genética de Palomas Domésticas (Columba livia) en Lorica, Colombia, Utilizando Genes que Codifican la Coloración del PlumajeCausil Vargas, Luis AlfonsoRodríguez De La Barrera, AdriánCausil Vargas, Orlandoallele frequenciesgenetic diversitygene flowHardy-Weinberg equilibriumfrecuencias alélicasdiversidad genéticaflujo génicoequilibrio Hardy-WeinbergThe aim of this study was to evaluate the genetic diversity of populations of domestic pigeons (Columba livia) in Lorica, Colombia using genes that encode plumage color. Random sampling were made in six colonies between November and December 2015. Through urban excursions, direct observation and photographic records, 356 pigeons were studied. Autosomal markers that encode plumage coloration and design were used: Grizzle (G), Spread (S), Checker (C), and sex-linked locus Ash-Red (B). The genetic parameters allele frequencies, genetic diversity, Hardy-Weinberg equilibrium and population structure were calculated by PopGene 1.31, genetic structure and genetic distance by FSTAT v.2.9.3.2 and the dendrogram was made using the program MEGA 5. Spread and Checker markers were the most frequent, while Ash-Red marker presented the lowest values. Low genetic differentiation was obtained among populations and high gene flow and therefore, it is assumed absence of inbreeding. Besides, an excess of heterozygotes and absence of Hardy-Weinberg equilibrium was observed, and possible natural selection for the Spread marker was evident.El objetivo de este trabajo fue evaluar la diversidad genética de las poblaciones de palomas domésticas (Columba livia) en Lorica, Colombia, utilizando genes que codifican la coloración y diseño del plumaje. Se realizaron muestreos aleatorios en seis colonias entre noviembre y diciembre de 2015. Mediante excursiones urbanas, observación directa y registros fotográficos se estudiaron 356 palomas. Se utilizaron los marcadores autosómicos que codifican la coloración y diseño del plumaje: Grizzle (G), Spread (S), Checker (C), y el locus ligado al sexo Ash-Red (B). Los parámetros genéticos de frecuencia alélica, diversidad genética, equilibrio Hardy-Weinberg y estructura poblacional fueron calculados a través del programa PopGene 1.31, la estructura genética y la distancia genética mediante el programa FSTAT v. 2.9.3.2, y el dendrograma se realizó con el programa MEGA 5. Los marcadores Spread y Checker fueron los de mayor frecuencia, mientras el marcador Ash-Red presentó los valores más bajos. Se obtuvo escasa diferenciación genética entre las poblaciones y un elevado flujo génico, por lo que se asume ausencia de consanguinidad. Además, se observó un exceso de heterocigotos y ausencia de equilibrio Hardy-Weinberg, y se evidenció posible selección natural para el marcador Spread.Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria2016-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/1147610.15381/rivep.v27i3.11476Revista de Investigaciones Veterinarias del Perú; Vol. 27 Núm. 3 (2016); 448-457Revista de Investigaciones Veterinarias del Perú; Vol. 27 No. 3 (2016); 448-4571682-34191609-9117reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476/11214Derechos de autor 2016 Luis Alfonso Causil Vargas, Adrián Rodríguez De La Barrera, Orlando Causil Vargashttps://creativecommons.org/licenses/by-nc-sa/4.0info:eu-repo/semantics/openAccessoai:ojs.csi.unmsm:article/114762017-02-20T16:28:53Z
dc.title.none.fl_str_mv Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
Diversidad Genética de Palomas Domésticas (Columba livia) en Lorica, Colombia, Utilizando Genes que Codifican la Coloración del Plumaje
title Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
spellingShingle Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
Causil Vargas, Luis Alfonso
allele frequencies
genetic diversity
gene flow
Hardy-Weinberg equilibrium
frecuencias alélicas
diversidad genética
flujo génico
equilibrio Hardy-Weinberg
title_short Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
title_full Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
title_fullStr Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
title_full_unstemmed Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
title_sort Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
dc.creator.none.fl_str_mv Causil Vargas, Luis Alfonso
Rodríguez De La Barrera, Adrián
Causil Vargas, Orlando
author Causil Vargas, Luis Alfonso
author_facet Causil Vargas, Luis Alfonso
Rodríguez De La Barrera, Adrián
Causil Vargas, Orlando
author_role author
author2 Rodríguez De La Barrera, Adrián
Causil Vargas, Orlando
author2_role author
author
dc.subject.none.fl_str_mv allele frequencies
genetic diversity
gene flow
Hardy-Weinberg equilibrium
frecuencias alélicas
diversidad genética
flujo génico
equilibrio Hardy-Weinberg
topic allele frequencies
genetic diversity
gene flow
Hardy-Weinberg equilibrium
frecuencias alélicas
diversidad genética
flujo génico
equilibrio Hardy-Weinberg
description The aim of this study was to evaluate the genetic diversity of populations of domestic pigeons (Columba livia) in Lorica, Colombia using genes that encode plumage color. Random sampling were made in six colonies between November and December 2015. Through urban excursions, direct observation and photographic records, 356 pigeons were studied. Autosomal markers that encode plumage coloration and design were used: Grizzle (G), Spread (S), Checker (C), and sex-linked locus Ash-Red (B). The genetic parameters allele frequencies, genetic diversity, Hardy-Weinberg equilibrium and population structure were calculated by PopGene 1.31, genetic structure and genetic distance by FSTAT v.2.9.3.2 and the dendrogram was made using the program MEGA 5. Spread and Checker markers were the most frequent, while Ash-Red marker presented the lowest values. Low genetic differentiation was obtained among populations and high gene flow and therefore, it is assumed absence of inbreeding. Besides, an excess of heterozygotes and absence of Hardy-Weinberg equilibrium was observed, and possible natural selection for the Spread marker was evident.
publishDate 2016
dc.date.none.fl_str_mv 2016-10-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476
10.15381/rivep.v27i3.11476
url https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476
identifier_str_mv 10.15381/rivep.v27i3.11476
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476/11214
dc.rights.none.fl_str_mv https://creativecommons.org/licenses/by-nc-sa/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
dc.source.none.fl_str_mv Revista de Investigaciones Veterinarias del Perú; Vol. 27 Núm. 3 (2016); 448-457
Revista de Investigaciones Veterinarias del Perú; Vol. 27 No. 3 (2016); 448-457
1682-3419
1609-9117
reponame:Revistas - Universidad Nacional Mayor de San Marcos
instname:Universidad Nacional Mayor de San Marcos
instacron:UNMSM
instname_str Universidad Nacional Mayor de San Marcos
instacron_str UNMSM
institution UNMSM
reponame_str Revistas - Universidad Nacional Mayor de San Marcos
collection Revistas - Universidad Nacional Mayor de San Marcos
repository.name.fl_str_mv
repository.mail.fl_str_mv
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