Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour
Descripción del Articulo
The aim of this study was to evaluate the genetic diversity of populations of domestic pigeons (Columba livia) in Lorica, Colombia using genes that encode plumage color. Random sampling were made in six colonies between November and December 2015. Through urban excursions, direct observation and pho...
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Formato: | artículo |
Fecha de Publicación: | 2016 |
Institución: | Universidad Nacional Mayor de San Marcos |
Repositorio: | Revistas - Universidad Nacional Mayor de San Marcos |
Lenguaje: | español |
OAI Identifier: | oai:ojs.csi.unmsm:article/11476 |
Enlace del recurso: | https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476 |
Nivel de acceso: | acceso abierto |
Materia: | allele frequencies genetic diversity gene flow Hardy-Weinberg equilibrium frecuencias alélicas diversidad genética flujo génico equilibrio Hardy-Weinberg |
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Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colourDiversidad Genética de Palomas Domésticas (Columba livia) en Lorica, Colombia, Utilizando Genes que Codifican la Coloración del PlumajeCausil Vargas, Luis AlfonsoRodríguez De La Barrera, AdriánCausil Vargas, Orlandoallele frequenciesgenetic diversitygene flowHardy-Weinberg equilibriumfrecuencias alélicasdiversidad genéticaflujo génicoequilibrio Hardy-WeinbergThe aim of this study was to evaluate the genetic diversity of populations of domestic pigeons (Columba livia) in Lorica, Colombia using genes that encode plumage color. Random sampling were made in six colonies between November and December 2015. Through urban excursions, direct observation and photographic records, 356 pigeons were studied. Autosomal markers that encode plumage coloration and design were used: Grizzle (G), Spread (S), Checker (C), and sex-linked locus Ash-Red (B). The genetic parameters allele frequencies, genetic diversity, Hardy-Weinberg equilibrium and population structure were calculated by PopGene 1.31, genetic structure and genetic distance by FSTAT v.2.9.3.2 and the dendrogram was made using the program MEGA 5. Spread and Checker markers were the most frequent, while Ash-Red marker presented the lowest values. Low genetic differentiation was obtained among populations and high gene flow and therefore, it is assumed absence of inbreeding. Besides, an excess of heterozygotes and absence of Hardy-Weinberg equilibrium was observed, and possible natural selection for the Spread marker was evident.El objetivo de este trabajo fue evaluar la diversidad genética de las poblaciones de palomas domésticas (Columba livia) en Lorica, Colombia, utilizando genes que codifican la coloración y diseño del plumaje. Se realizaron muestreos aleatorios en seis colonias entre noviembre y diciembre de 2015. Mediante excursiones urbanas, observación directa y registros fotográficos se estudiaron 356 palomas. Se utilizaron los marcadores autosómicos que codifican la coloración y diseño del plumaje: Grizzle (G), Spread (S), Checker (C), y el locus ligado al sexo Ash-Red (B). Los parámetros genéticos de frecuencia alélica, diversidad genética, equilibrio Hardy-Weinberg y estructura poblacional fueron calculados a través del programa PopGene 1.31, la estructura genética y la distancia genética mediante el programa FSTAT v. 2.9.3.2, y el dendrograma se realizó con el programa MEGA 5. Los marcadores Spread y Checker fueron los de mayor frecuencia, mientras el marcador Ash-Red presentó los valores más bajos. Se obtuvo escasa diferenciación genética entre las poblaciones y un elevado flujo génico, por lo que se asume ausencia de consanguinidad. Además, se observó un exceso de heterocigotos y ausencia de equilibrio Hardy-Weinberg, y se evidenció posible selección natural para el marcador Spread.Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria2016-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/1147610.15381/rivep.v27i3.11476Revista de Investigaciones Veterinarias del Perú; Vol. 27 Núm. 3 (2016); 448-457Revista de Investigaciones Veterinarias del Perú; Vol. 27 No. 3 (2016); 448-4571682-34191609-9117reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476/11214Derechos de autor 2016 Luis Alfonso Causil Vargas, Adrián Rodríguez De La Barrera, Orlando Causil Vargashttps://creativecommons.org/licenses/by-nc-sa/4.0info:eu-repo/semantics/openAccessoai:ojs.csi.unmsm:article/114762017-02-20T16:28:53Z |
dc.title.none.fl_str_mv |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour Diversidad Genética de Palomas Domésticas (Columba livia) en Lorica, Colombia, Utilizando Genes que Codifican la Coloración del Plumaje |
title |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour |
spellingShingle |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour Causil Vargas, Luis Alfonso allele frequencies genetic diversity gene flow Hardy-Weinberg equilibrium frecuencias alélicas diversidad genética flujo génico equilibrio Hardy-Weinberg |
title_short |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour |
title_full |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour |
title_fullStr |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour |
title_full_unstemmed |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour |
title_sort |
Genetic diversity of the domestic pigeon (Columba livia) in Lorica, Colombia using genes that encode plumage colour |
dc.creator.none.fl_str_mv |
Causil Vargas, Luis Alfonso Rodríguez De La Barrera, Adrián Causil Vargas, Orlando |
author |
Causil Vargas, Luis Alfonso |
author_facet |
Causil Vargas, Luis Alfonso Rodríguez De La Barrera, Adrián Causil Vargas, Orlando |
author_role |
author |
author2 |
Rodríguez De La Barrera, Adrián Causil Vargas, Orlando |
author2_role |
author author |
dc.subject.none.fl_str_mv |
allele frequencies genetic diversity gene flow Hardy-Weinberg equilibrium frecuencias alélicas diversidad genética flujo génico equilibrio Hardy-Weinberg |
topic |
allele frequencies genetic diversity gene flow Hardy-Weinberg equilibrium frecuencias alélicas diversidad genética flujo génico equilibrio Hardy-Weinberg |
description |
The aim of this study was to evaluate the genetic diversity of populations of domestic pigeons (Columba livia) in Lorica, Colombia using genes that encode plumage color. Random sampling were made in six colonies between November and December 2015. Through urban excursions, direct observation and photographic records, 356 pigeons were studied. Autosomal markers that encode plumage coloration and design were used: Grizzle (G), Spread (S), Checker (C), and sex-linked locus Ash-Red (B). The genetic parameters allele frequencies, genetic diversity, Hardy-Weinberg equilibrium and population structure were calculated by PopGene 1.31, genetic structure and genetic distance by FSTAT v.2.9.3.2 and the dendrogram was made using the program MEGA 5. Spread and Checker markers were the most frequent, while Ash-Red marker presented the lowest values. Low genetic differentiation was obtained among populations and high gene flow and therefore, it is assumed absence of inbreeding. Besides, an excess of heterozygotes and absence of Hardy-Weinberg equilibrium was observed, and possible natural selection for the Spread marker was evident. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-10-01 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476 10.15381/rivep.v27i3.11476 |
url |
https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476 |
identifier_str_mv |
10.15381/rivep.v27i3.11476 |
dc.language.none.fl_str_mv |
spa |
language |
spa |
dc.relation.none.fl_str_mv |
https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/11476/11214 |
dc.rights.none.fl_str_mv |
https://creativecommons.org/licenses/by-nc-sa/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria |
publisher.none.fl_str_mv |
Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria |
dc.source.none.fl_str_mv |
Revista de Investigaciones Veterinarias del Perú; Vol. 27 Núm. 3 (2016); 448-457 Revista de Investigaciones Veterinarias del Perú; Vol. 27 No. 3 (2016); 448-457 1682-3419 1609-9117 reponame:Revistas - Universidad Nacional Mayor de San Marcos instname:Universidad Nacional Mayor de San Marcos instacron:UNMSM |
instname_str |
Universidad Nacional Mayor de San Marcos |
instacron_str |
UNMSM |
institution |
UNMSM |
reponame_str |
Revistas - Universidad Nacional Mayor de San Marcos |
collection |
Revistas - Universidad Nacional Mayor de San Marcos |
repository.name.fl_str_mv |
|
repository.mail.fl_str_mv |
|
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1795238226749816832 |
score |
13.772021 |
Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).