Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region

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The sheep populations of the Colombian Caribbean Region are characterized by having a high phenotypic heterogeneity mainly due to the use of Creole animals in crossbreeding with exotic breeds. The aim of this study was to estimate the genetic diversity and the population structure of sheep in this r...

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Detalles Bibliográficos
Autores: Cañas-Alvarez, Jhon Jacobo, Carrascal-Triana, Erly Luisana, Herrera Pérez, Natalia, Rua Bustamante, Viviana, Burgos-Paz, William
Formato: artículo
Fecha de Publicación:2023
Institución:Universidad Nacional Mayor de San Marcos
Repositorio:Revistas - Universidad Nacional Mayor de San Marcos
Lenguaje:español
OAI Identifier:oai:ojs.csi.unmsm:article/23847
Enlace del recurso:https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/23847
Nivel de acceso:acceso abierto
Materia:genetic diversity
population structure
crossbreeding
sheep
diversidad genética
estructura poblacional
mestizaje
ovinos
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spelling Genetic diversity and population structure in hair sheep from the Colombian Caribbean RegionDiversidad genética y estructura poblacional en ovinos de pelo de la Región Caribe colombianaCañas-Alvarez, Jhon JacoboCarrascal-Triana, Erly LuisanaHerrera Pérez, NataliaRua Bustamante, VivianaBurgos-Paz, WilliamCañas-Alvarez, Jhon JacoboCarrascal-Triana, Erly LuisanaHerrera Pérez, NataliaRua Bustamante, VivianaBurgos-Paz, Williamgenetic diversitypopulation structurecrossbreedingsheepdiversidad genéticaestructura poblacionalmestizajeovinosThe sheep populations of the Colombian Caribbean Region are characterized by having a high phenotypic heterogeneity mainly due to the use of Creole animals in crossbreeding with exotic breeds. The aim of this study was to estimate the genetic diversity and the population structure of sheep in this region. In total, 459 sheep from 26 farms in 19 municipalities were selected. The DNA samples were genotyped with the ovine low-density chip (15K). Analyses of molecular variance, genetic diversity and population structure were performed. At the phenotypic level, 65.8% of the sampled animals were assigned to the Criollo population, while 15.7% showed signs of introgression with other commercial breeds (mestizos). The populations presented a high degree of genetic diversity within individuals (90.6%) and low levels of genetic variation between populations (FST = 0.075). This low differentiation, together with the low levels of genetic variation between populations, could be attributed to a lack of selection pressure and the existence of gene flow (crossbreeding) between populations.Las poblaciones ovinas de la Región Caribe colombiana se caracterizan por tener una alta heterogeneidad fenotípica debido principalmente al uso de animales criollos en cruzamiento con razas exóticas. El presente estudio tuvo como objetivo estimar la diver-sidad genética y la estructura poblacional de ovinos de esta región. Se seleccionaron 459 animales ovinos de 26 granjas de 19 municipios. Las muestras de ADN fueron genotipadas con el chip ovino de baja densidad (15K). Se realizaron análisis de varianza molecular, diversidad genética y estructura poblacional. A nivel fenotípico, se asignó el 65.8% de los animales muestreados a la población Criollo mientras que 15.7% presentaron señales de introgresión con otras razas comerciales (mestizos). Las poblaciones presentaron un alto grado de diversidad genética dentro de los individuos (90.6%) y bajos niveles de variación genética entre poblaciones (FST = 0.075). Esta baja diferenciación, junto con los bajos niveles de variación genética entre poblaciones podría atribuirse a una falta de presión de selección y a la existencia de un flujo genético (mestizaje) entre las poblaciones.Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria2023-06-29info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/2384710.15381/rivep.v34i3.23847Revista de Investigaciones Veterinarias del Perú; Vol. 34 Núm. 3 (2023); e23847Revista de Investigaciones Veterinarias del Perú; Vol. 34 No. 3 (2023); e238471682-34191609-9117reponame:Revistas - Universidad Nacional Mayor de San Marcosinstname:Universidad Nacional Mayor de San Marcosinstacron:UNMSMspahttps://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/23847/19731Derechos de autor 2023 Jhon Jacobo Cañas-Alvarez, Erly Luisana Carrascal-Triana, Natalia Herrera Pérez, Viviana Rua Bustamante, William Burgos-Pazhttp://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessoai:ojs.csi.unmsm:article/238472023-06-30T05:14:55Z
dc.title.none.fl_str_mv Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
Diversidad genética y estructura poblacional en ovinos de pelo de la Región Caribe colombiana
title Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
spellingShingle Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
Cañas-Alvarez, Jhon Jacobo
genetic diversity
population structure
crossbreeding
sheep
diversidad genética
estructura poblacional
mestizaje
ovinos
title_short Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
title_full Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
title_fullStr Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
title_full_unstemmed Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
title_sort Genetic diversity and population structure in hair sheep from the Colombian Caribbean Region
dc.creator.none.fl_str_mv Cañas-Alvarez, Jhon Jacobo
Carrascal-Triana, Erly Luisana
Herrera Pérez, Natalia
Rua Bustamante, Viviana
Burgos-Paz, William
Cañas-Alvarez, Jhon Jacobo
Carrascal-Triana, Erly Luisana
Herrera Pérez, Natalia
Rua Bustamante, Viviana
Burgos-Paz, William
author Cañas-Alvarez, Jhon Jacobo
author_facet Cañas-Alvarez, Jhon Jacobo
Carrascal-Triana, Erly Luisana
Herrera Pérez, Natalia
Rua Bustamante, Viviana
Burgos-Paz, William
author_role author
author2 Carrascal-Triana, Erly Luisana
Herrera Pérez, Natalia
Rua Bustamante, Viviana
Burgos-Paz, William
author2_role author
author
author
author
dc.subject.none.fl_str_mv genetic diversity
population structure
crossbreeding
sheep
diversidad genética
estructura poblacional
mestizaje
ovinos
topic genetic diversity
population structure
crossbreeding
sheep
diversidad genética
estructura poblacional
mestizaje
ovinos
description The sheep populations of the Colombian Caribbean Region are characterized by having a high phenotypic heterogeneity mainly due to the use of Creole animals in crossbreeding with exotic breeds. The aim of this study was to estimate the genetic diversity and the population structure of sheep in this region. In total, 459 sheep from 26 farms in 19 municipalities were selected. The DNA samples were genotyped with the ovine low-density chip (15K). Analyses of molecular variance, genetic diversity and population structure were performed. At the phenotypic level, 65.8% of the sampled animals were assigned to the Criollo population, while 15.7% showed signs of introgression with other commercial breeds (mestizos). The populations presented a high degree of genetic diversity within individuals (90.6%) and low levels of genetic variation between populations (FST = 0.075). This low differentiation, together with the low levels of genetic variation between populations, could be attributed to a lack of selection pressure and the existence of gene flow (crossbreeding) between populations.
publishDate 2023
dc.date.none.fl_str_mv 2023-06-29
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/23847
10.15381/rivep.v34i3.23847
url https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/23847
identifier_str_mv 10.15381/rivep.v34i3.23847
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv https://revistasinvestigacion.unmsm.edu.pe/index.php/veterinaria/article/view/23847/19731
dc.rights.none.fl_str_mv http://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
publisher.none.fl_str_mv Universidad Nacional Mayor de San Marcos, Facultad de Medicina Veterinaria
dc.source.none.fl_str_mv Revista de Investigaciones Veterinarias del Perú; Vol. 34 Núm. 3 (2023); e23847
Revista de Investigaciones Veterinarias del Perú; Vol. 34 No. 3 (2023); e23847
1682-3419
1609-9117
reponame:Revistas - Universidad Nacional Mayor de San Marcos
instname:Universidad Nacional Mayor de San Marcos
instacron:UNMSM
instname_str Universidad Nacional Mayor de San Marcos
instacron_str UNMSM
institution UNMSM
reponame_str Revistas - Universidad Nacional Mayor de San Marcos
collection Revistas - Universidad Nacional Mayor de San Marcos
repository.name.fl_str_mv
repository.mail.fl_str_mv
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