Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach
Descripción del Articulo
This study was supported by National Institute of Agricultural Innovation (INIA) grant 004-2016-INIA-PNIA-UPMSI/IE through the National Program for Agricultural Innovation of Peru (PNIA), by grant 10-2018-FONDECYT-BM-ADT-AV from National Foundation for Scientific, Technological Development and Techn...
| Autores: | , , , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2021 |
| Institución: | Consejo Nacional de Ciencia Tecnología e Innovación |
| Repositorio: | CONCYTEC-Institucional |
| Lenguaje: | inglés |
| OAI Identifier: | oai:repositorio.concytec.gob.pe:20.500.12390/3068 |
| Enlace del recurso: | https://hdl.handle.net/20.500.12390/3068 https://doi.org/10.1080/00275514.2021.1917243 |
| Nivel de acceso: | acceso abierto |
| Materia: | Trichoderma 3 new taxa Cacao farm fungal diversity integrative approach multilocus phylogeny Peru species delimitation https://purl.org/pe-repo/ocde/ford#4.01.04 |
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| dc.title.none.fl_str_mv |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach |
| title |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach |
| spellingShingle |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach Bustamante D.E. Trichoderma 3 new taxa Cacao farm fungal diversity integrative approach multilocus phylogeny Peru species delimitation https://purl.org/pe-repo/ocde/ford#4.01.04 |
| title_short |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach |
| title_full |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach |
| title_fullStr |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach |
| title_full_unstemmed |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach |
| title_sort |
Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach |
| author |
Bustamante D.E. |
| author_facet |
Bustamante D.E. Calderon M.S. Leiva S. Mendoza J.E. Arce M. Oliva M. |
| author_role |
author |
| author2 |
Calderon M.S. Leiva S. Mendoza J.E. Arce M. Oliva M. |
| author2_role |
author author author author author |
| dc.contributor.author.fl_str_mv |
Bustamante D.E. Calderon M.S. Leiva S. Mendoza J.E. Arce M. Oliva M. |
| dc.subject.none.fl_str_mv |
Trichoderma |
| topic |
Trichoderma 3 new taxa Cacao farm fungal diversity integrative approach multilocus phylogeny Peru species delimitation https://purl.org/pe-repo/ocde/ford#4.01.04 |
| dc.subject.es_PE.fl_str_mv |
3 new taxa Cacao farm fungal diversity integrative approach multilocus phylogeny Peru species delimitation |
| dc.subject.ocde.none.fl_str_mv |
https://purl.org/pe-repo/ocde/ford#4.01.04 |
| description |
This study was supported by National Institute of Agricultural Innovation (INIA) grant 004-2016-INIA-PNIA-UPMSI/IE through the National Program for Agricultural Innovation of Peru (PNIA), by grant 10-2018-FONDECYT-BM-ADT-AV from National Foundation for Scientific, Technological Development and Technological Innovation (Fondecyt) of Peru, and by grant SNIP no. 352641?CEINCACAO. |
| publishDate |
2021 |
| dc.date.accessioned.none.fl_str_mv |
2024-05-30T23:13:38Z |
| dc.date.available.none.fl_str_mv |
2024-05-30T23:13:38Z |
| dc.date.issued.fl_str_mv |
2021 |
| dc.type.none.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12390/3068 |
| dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1080/00275514.2021.1917243 |
| dc.identifier.scopus.none.fl_str_mv |
2-s2.0-85107887541 |
| url |
https://hdl.handle.net/20.500.12390/3068 https://doi.org/10.1080/00275514.2021.1917243 |
| identifier_str_mv |
2-s2.0-85107887541 |
| dc.language.iso.none.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartof.none.fl_str_mv |
Mycologia |
| dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess |
| eu_rights_str_mv |
openAccess |
| dc.publisher.none.fl_str_mv |
Taylor and Francis Ltd. |
| publisher.none.fl_str_mv |
Taylor and Francis Ltd. |
| dc.source.none.fl_str_mv |
reponame:CONCYTEC-Institucional instname:Consejo Nacional de Ciencia Tecnología e Innovación instacron:CONCYTEC |
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Consejo Nacional de Ciencia Tecnología e Innovación |
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CONCYTEC |
| institution |
CONCYTEC |
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CONCYTEC-Institucional |
| collection |
CONCYTEC-Institucional |
| repository.name.fl_str_mv |
Repositorio Institucional CONCYTEC |
| repository.mail.fl_str_mv |
repositorio@concytec.gob.pe |
| _version_ |
1839175686590300160 |
| spelling |
Publicationrp08851600rp08852600rp00611600rp08850600rp08853600rp06281600Bustamante D.E.Calderon M.S.Leiva S.Mendoza J.E.Arce M.Oliva M.2024-05-30T23:13:38Z2024-05-30T23:13:38Z2021https://hdl.handle.net/20.500.12390/3068https://doi.org/10.1080/00275514.2021.19172432-s2.0-85107887541This study was supported by National Institute of Agricultural Innovation (INIA) grant 004-2016-INIA-PNIA-UPMSI/IE through the National Program for Agricultural Innovation of Peru (PNIA), by grant 10-2018-FONDECYT-BM-ADT-AV from National Foundation for Scientific, Technological Development and Technological Innovation (Fondecyt) of Peru, and by grant SNIP no. 352641?CEINCACAO.The hyperdiverse genus Trichoderma is one of most useful groups of microbes for a number of human activities, and their accurate identification is crucial. The structural simplicity and lack of distinctive phenotypic variation in this group enable the use of DNA-based species delimitation methods in combination with phylogenies (and morphology when feasible) to establish well-supported boundaries among species. Our study employed a multilocus phylogeny and four DNA-based methods (automated barcode gap discovery [ABGD], statistical parsimony [SPN], generalized mixed Yule coalescent [GMYC], and Bayesian phylogenetics and phylogeography [BPP]) for four molecular markers (acl1, act, rpb2, and tef1) to delimit species of two lineages of Trichoderma. Although incongruence among these methods was observed in our analyses, the genetic distance (ABGD) and coalescence (BPP) methods and the multilocus phylogeny strongly supported and confirmed recognition of 108 and 39 different species in the Harzianum and Longibrachiatum lineages, including three new species associated with cacao farms in northern Peru, namely, T.awajun, sp. nov., T.jaklitschii, sp. nov., and T.peruvianum, sp. nov. Morphological distinctions between the new species and their close relatives are primarily related to growth rates, colony appearance, and size of phialides and conidia. This study confirmed that an integrative approach (DNA-based methods, multilocus phylogeny, and phenotype) is more likely to reliably verify supported species boundaries in Trichoderma. © 2021 The Mycological Society of America.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengTaylor and Francis Ltd.Mycologiainfo:eu-repo/semantics/openAccessTrichoderma3 new taxa-1Cacao farm-1fungal diversity-1integrative approach-1multilocus phylogeny-1Peru-1species delimitation-1https://purl.org/pe-repo/ocde/ford#4.01.04-1Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approachinfo:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTEC20.500.12390/3068oai:repositorio.concytec.gob.pe:20.500.12390/30682024-05-30 16:13:42.102http://purl.org/coar/access_right/c_14cbinfo:eu-repo/semantics/closedAccessmetadata only accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="a666380d-95ec-4071-8e41-32eb61b7db52"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Three new species of Trichoderma in the Harzianum and Longibrachiatum lineages from Peruvian cacao crop soils based on an integrative approach</Title> <PublishedIn> <Publication> <Title>Mycologia</Title> </Publication> </PublishedIn> <PublicationDate>2021</PublicationDate> <DOI>https://doi.org/10.1080/00275514.2021.1917243</DOI> <SCP-Number>2-s2.0-85107887541</SCP-Number> <Authors> <Author> <DisplayName>Bustamante D.E.</DisplayName> <Person id="rp08851" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Calderon M.S.</DisplayName> <Person id="rp08852" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Leiva S.</DisplayName> <Person id="rp00611" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Mendoza J.E.</DisplayName> <Person id="rp08850" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Arce M.</DisplayName> <Person id="rp08853" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Oliva M.</DisplayName> <Person id="rp06281" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>Taylor and Francis Ltd.</DisplayName> <OrgUnit /> </Publisher> </Publishers> <Keyword>Trichoderma</Keyword> <Keyword>3 new taxa</Keyword> <Keyword>Cacao farm</Keyword> <Keyword>fungal diversity</Keyword> <Keyword>integrative approach</Keyword> <Keyword>multilocus phylogeny</Keyword> <Keyword>Peru</Keyword> <Keyword>species delimitation</Keyword> <Abstract>The hyperdiverse genus Trichoderma is one of most useful groups of microbes for a number of human activities, and their accurate identification is crucial. The structural simplicity and lack of distinctive phenotypic variation in this group enable the use of DNA-based species delimitation methods in combination with phylogenies (and morphology when feasible) to establish well-supported boundaries among species. Our study employed a multilocus phylogeny and four DNA-based methods (automated barcode gap discovery [ABGD], statistical parsimony [SPN], generalized mixed Yule coalescent [GMYC], and Bayesian phylogenetics and phylogeography [BPP]) for four molecular markers (acl1, act, rpb2, and tef1) to delimit species of two lineages of Trichoderma. Although incongruence among these methods was observed in our analyses, the genetic distance (ABGD) and coalescence (BPP) methods and the multilocus phylogeny strongly supported and confirmed recognition of 108 and 39 different species in the Harzianum and Longibrachiatum lineages, including three new species associated with cacao farms in northern Peru, namely, T.awajun, sp. nov., T.jaklitschii, sp. nov., and T.peruvianum, sp. nov. Morphological distinctions between the new species and their close relatives are primarily related to growth rates, colony appearance, and size of phialides and conidia. This study confirmed that an integrative approach (DNA-based methods, multilocus phylogeny, and phenotype) is more likely to reliably verify supported species boundaries in Trichoderma. © 2021 The Mycological Society of America.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1 |
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13.448595 |
Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
