Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?

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Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and...

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Detalles Bibliográficos
Autores: Rebaza T.D., Ludeña Y., Samolski I., Villena G.K.
Formato: artículo
Fecha de Publicación:2020
Institución:Consejo Nacional de Ciencia Tecnología e Innovación
Repositorio:CONCYTEC-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.concytec.gob.pe:20.500.12390/2436
Enlace del recurso:https://hdl.handle.net/20.500.12390/2436
https://doi.org/10.3390/jof6040376
Nivel de acceso:acceso abierto
Materia:Virulence
Aspergillus fumigatus
Biofilms
Gene expression
http://purl.org/pe-repo/ocde/ford#4.04.02
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dc.title.none.fl_str_mv Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
title Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
spellingShingle Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
Rebaza T.D.
Virulence
Aspergillus fumigatus
Aspergillus fumigatus
Biofilms
Gene expression
http://purl.org/pe-repo/ocde/ford#4.04.02
title_short Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
title_full Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
title_fullStr Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
title_full_unstemmed Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
title_sort Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
author Rebaza T.D.
author_facet Rebaza T.D.
Ludeña Y.
Samolski I.
Villena G.K.
author_role author
author2 Ludeña Y.
Samolski I.
Villena G.K.
author2_role author
author
author
dc.contributor.author.fl_str_mv Rebaza T.D.
Ludeña Y.
Samolski I.
Villena G.K.
dc.subject.none.fl_str_mv Virulence
topic Virulence
Aspergillus fumigatus
Aspergillus fumigatus
Biofilms
Gene expression
http://purl.org/pe-repo/ocde/ford#4.04.02
dc.subject.es_PE.fl_str_mv Aspergillus fumigatus
Aspergillus fumigatus
Biofilms
Gene expression
dc.subject.ocde.none.fl_str_mv http://purl.org/pe-repo/ocde/ford#4.04.02
description Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and biofilms developed on polyester cloth and polystyrene microplates. For this, virulence-related genes reported for the clinical strain Af293 were searched in A. fumigatus LMB 35-Aa genome, and 15 genes were identified including those for the synthesis of cell wall components, hydrophobins, invasins, efflux transporters, mycotoxins and regulators. When compared with planktonic cultures at 37?C, invasin gene calA was upregulated in both types of biofilm and efflux transporter genes mdr4 and atrF were predominantly upregulated in biofilms on polystyrene, while aspHs and ftmA were upregulated only in biofilms formed on polyester. Regarding the transcription regulators, laeA was downregulated in biofilms, and medA did not show a significant change. The effect of temperature was also evaluated by comparing the biofilms grown on polyester at 37 vs. 28?C. Non-significant changes at the expression level were found for most genes evaluated, except for atrF, gliZ and medA, which were significantly downregulated at 37?C. According to these results, virulence appears to depend on the interaction of several factors in addition to biofilms and growth temperature. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.available.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.issued.fl_str_mv 2020
dc.type.none.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.none.fl_str_mv Rebaza, T. D., Ludeña, Y., Samolski, I., & Villena, G. K. (2020). Gene Expression Analysis of Non-Clinical Strain of Aspergillus fumigatus (LMB-35Aa): Does Biofilm Affect Virulence? Journal of Fungi, 6(4), 376. https://doi.org/10.3390/jof6040376
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12390/2436
dc.identifier.doi.none.fl_str_mv https://doi.org/10.3390/jof6040376
dc.identifier.scopus.none.fl_str_mv 2-s2.0-85098133691
identifier_str_mv Rebaza, T. D., Ludeña, Y., Samolski, I., & Villena, G. K. (2020). Gene Expression Analysis of Non-Clinical Strain of Aspergillus fumigatus (LMB-35Aa): Does Biofilm Affect Virulence? Journal of Fungi, 6(4), 376. https://doi.org/10.3390/jof6040376
2-s2.0-85098133691
url https://hdl.handle.net/20.500.12390/2436
https://doi.org/10.3390/jof6040376
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv Journal of Fungi
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.none.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.publisher.none.fl_str_mv MDPI AG
publisher.none.fl_str_mv MDPI AG
dc.source.none.fl_str_mv reponame:CONCYTEC-Institucional
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spelling Publicationrp06058600rp01495600rp06057600rp01493600Rebaza T.D.Ludeña Y.Samolski I.Villena G.K.2024-05-30T23:13:38Z2024-05-30T23:13:38Z2020Rebaza, T. D., Ludeña, Y., Samolski, I., & Villena, G. K. (2020). Gene Expression Analysis of Non-Clinical Strain of Aspergillus fumigatus (LMB-35Aa): Does Biofilm Affect Virulence? Journal of Fungi, 6(4), 376. https://doi.org/10.3390/jof6040376https://hdl.handle.net/20.500.12390/2436https://doi.org/10.3390/jof60403762-s2.0-85098133691Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and biofilms developed on polyester cloth and polystyrene microplates. For this, virulence-related genes reported for the clinical strain Af293 were searched in A. fumigatus LMB 35-Aa genome, and 15 genes were identified including those for the synthesis of cell wall components, hydrophobins, invasins, efflux transporters, mycotoxins and regulators. When compared with planktonic cultures at 37?C, invasin gene calA was upregulated in both types of biofilm and efflux transporter genes mdr4 and atrF were predominantly upregulated in biofilms on polystyrene, while aspHs and ftmA were upregulated only in biofilms formed on polyester. Regarding the transcription regulators, laeA was downregulated in biofilms, and medA did not show a significant change. The effect of temperature was also evaluated by comparing the biofilms grown on polyester at 37 vs. 28?C. Non-significant changes at the expression level were found for most genes evaluated, except for atrF, gliZ and medA, which were significantly downregulated at 37?C. According to these results, virulence appears to depend on the interaction of several factors in addition to biofilms and growth temperature. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengMDPI AGJournal of Fungiinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/VirulenceAspergillus fumigatus-1Aspergillus fumigatus-1Biofilms-1Gene expression-1http://purl.org/pe-repo/ocde/ford#4.04.02-1Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?info:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTECORIGINALGene Expression-Journal of Fungi.pdfGene Expression-Journal of Fungi.pdfapplication/pdf1121099https://repositorio.concytec.gob.pe/bitstreams/9e07e5e1-f14b-4274-a184-9259667e2f10/download9b8cb1a7adc9f08ea24c1e27bfce48a2MD51TEXTGene Expression-Journal of Fungi.pdf.txtGene Expression-Journal of Fungi.pdf.txtExtracted texttext/plain53500https://repositorio.concytec.gob.pe/bitstreams/6b6e5779-f583-481e-bf70-7406a89bd5ec/download23e03b6c41ea76d3eeab33afe686f7baMD52THUMBNAILGene Expression-Journal of Fungi.pdf.jpgGene Expression-Journal of Fungi.pdf.jpgGenerated Thumbnailimage/jpeg5450https://repositorio.concytec.gob.pe/bitstreams/703656c7-eab4-4e67-90e8-42fffb90c2ae/download57c00f8c8884280747dd839df2a3a363MD5320.500.12390/2436oai:repositorio.concytec.gob.pe:20.500.12390/24362025-01-17 22:00:35.704https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2info:eu-repo/semantics/openAccessopen accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="cc2a0d73-128b-4c01-8145-ef11080e336a"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?</Title> <PublishedIn> <Publication> <Title>Journal of Fungi</Title> </Publication> </PublishedIn> <PublicationDate>2020</PublicationDate> <DOI>https://doi.org/10.3390/jof6040376</DOI> <SCP-Number>2-s2.0-85098133691</SCP-Number> <Authors> <Author> <DisplayName>Rebaza T.D.</DisplayName> <Person id="rp06058" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Ludeña Y.</DisplayName> <Person id="rp01495" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Samolski I.</DisplayName> <Person id="rp06057" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Villena G.K.</DisplayName> <Person id="rp01493" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>MDPI AG</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>https://creativecommons.org/licenses/by-nc-nd/4.0/</License> <Keyword>Virulence</Keyword> <Keyword>Aspergillus fumigatus</Keyword> <Keyword>Aspergillus fumigatus</Keyword> <Keyword>Biofilms</Keyword> <Keyword>Gene expression</Keyword> <Abstract>Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and biofilms developed on polyester cloth and polystyrene microplates. For this, virulence-related genes reported for the clinical strain Af293 were searched in A. fumigatus LMB 35-Aa genome, and 15 genes were identified including those for the synthesis of cell wall components, hydrophobins, invasins, efflux transporters, mycotoxins and regulators. When compared with planktonic cultures at 37?C, invasin gene calA was upregulated in both types of biofilm and efflux transporter genes mdr4 and atrF were predominantly upregulated in biofilms on polystyrene, while aspHs and ftmA were upregulated only in biofilms formed on polyester. Regarding the transcription regulators, laeA was downregulated in biofilms, and medA did not show a significant change. The effect of temperature was also evaluated by comparing the biofilms grown on polyester at 37 vs. 28?C. Non-significant changes at the expression level were found for most genes evaluated, except for atrF, gliZ and medA, which were significantly downregulated at 37?C. According to these results, virulence appears to depend on the interaction of several factors in addition to biofilms and growth temperature. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1
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