Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?
Descripción del Articulo
Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and...
Autores: | , , , |
---|---|
Formato: | artículo |
Fecha de Publicación: | 2020 |
Institución: | Consejo Nacional de Ciencia Tecnología e Innovación |
Repositorio: | CONCYTEC-Institucional |
Lenguaje: | inglés |
OAI Identifier: | oai:repositorio.concytec.gob.pe:20.500.12390/2436 |
Enlace del recurso: | https://hdl.handle.net/20.500.12390/2436 https://doi.org/10.3390/jof6040376 |
Nivel de acceso: | acceso abierto |
Materia: | Virulence Aspergillus fumigatus Biofilms Gene expression http://purl.org/pe-repo/ocde/ford#4.04.02 |
id |
CONC_43e63b3d2dd54173c74b2a2aeb3fd639 |
---|---|
oai_identifier_str |
oai:repositorio.concytec.gob.pe:20.500.12390/2436 |
network_acronym_str |
CONC |
network_name_str |
CONCYTEC-Institucional |
repository_id_str |
4689 |
dc.title.none.fl_str_mv |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? |
title |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? |
spellingShingle |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? Rebaza T.D. Virulence Aspergillus fumigatus Aspergillus fumigatus Biofilms Gene expression http://purl.org/pe-repo/ocde/ford#4.04.02 |
title_short |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? |
title_full |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? |
title_fullStr |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? |
title_full_unstemmed |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? |
title_sort |
Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence? |
author |
Rebaza T.D. |
author_facet |
Rebaza T.D. Ludeña Y. Samolski I. Villena G.K. |
author_role |
author |
author2 |
Ludeña Y. Samolski I. Villena G.K. |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Rebaza T.D. Ludeña Y. Samolski I. Villena G.K. |
dc.subject.none.fl_str_mv |
Virulence |
topic |
Virulence Aspergillus fumigatus Aspergillus fumigatus Biofilms Gene expression http://purl.org/pe-repo/ocde/ford#4.04.02 |
dc.subject.es_PE.fl_str_mv |
Aspergillus fumigatus Aspergillus fumigatus Biofilms Gene expression |
dc.subject.ocde.none.fl_str_mv |
http://purl.org/pe-repo/ocde/ford#4.04.02 |
description |
Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and biofilms developed on polyester cloth and polystyrene microplates. For this, virulence-related genes reported for the clinical strain Af293 were searched in A. fumigatus LMB 35-Aa genome, and 15 genes were identified including those for the synthesis of cell wall components, hydrophobins, invasins, efflux transporters, mycotoxins and regulators. When compared with planktonic cultures at 37?C, invasin gene calA was upregulated in both types of biofilm and efflux transporter genes mdr4 and atrF were predominantly upregulated in biofilms on polystyrene, while aspHs and ftmA were upregulated only in biofilms formed on polyester. Regarding the transcription regulators, laeA was downregulated in biofilms, and medA did not show a significant change. The effect of temperature was also evaluated by comparing the biofilms grown on polyester at 37 vs. 28?C. Non-significant changes at the expression level were found for most genes evaluated, except for atrF, gliZ and medA, which were significantly downregulated at 37?C. According to these results, virulence appears to depend on the interaction of several factors in addition to biofilms and growth temperature. © 2020 by the authors. Licensee MDPI, Basel, Switzerland. |
publishDate |
2020 |
dc.date.accessioned.none.fl_str_mv |
2024-05-30T23:13:38Z |
dc.date.available.none.fl_str_mv |
2024-05-30T23:13:38Z |
dc.date.issued.fl_str_mv |
2020 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
dc.identifier.citation.none.fl_str_mv |
Rebaza, T. D., Ludeña, Y., Samolski, I., & Villena, G. K. (2020). Gene Expression Analysis of Non-Clinical Strain of Aspergillus fumigatus (LMB-35Aa): Does Biofilm Affect Virulence? Journal of Fungi, 6(4), 376. https://doi.org/10.3390/jof6040376 |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12390/2436 |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.3390/jof6040376 |
dc.identifier.scopus.none.fl_str_mv |
2-s2.0-85098133691 |
identifier_str_mv |
Rebaza, T. D., Ludeña, Y., Samolski, I., & Villena, G. K. (2020). Gene Expression Analysis of Non-Clinical Strain of Aspergillus fumigatus (LMB-35Aa): Does Biofilm Affect Virulence? Journal of Fungi, 6(4), 376. https://doi.org/10.3390/jof6040376 2-s2.0-85098133691 |
url |
https://hdl.handle.net/20.500.12390/2436 https://doi.org/10.3390/jof6040376 |
dc.language.iso.none.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.none.fl_str_mv |
Journal of Fungi |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.none.fl_str_mv |
https://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-nd/4.0/ |
dc.publisher.none.fl_str_mv |
MDPI AG |
publisher.none.fl_str_mv |
MDPI AG |
dc.source.none.fl_str_mv |
reponame:CONCYTEC-Institucional instname:Consejo Nacional de Ciencia Tecnología e Innovación instacron:CONCYTEC |
instname_str |
Consejo Nacional de Ciencia Tecnología e Innovación |
instacron_str |
CONCYTEC |
institution |
CONCYTEC |
reponame_str |
CONCYTEC-Institucional |
collection |
CONCYTEC-Institucional |
bitstream.url.fl_str_mv |
https://repositorio.concytec.gob.pe/bitstreams/9e07e5e1-f14b-4274-a184-9259667e2f10/download https://repositorio.concytec.gob.pe/bitstreams/6b6e5779-f583-481e-bf70-7406a89bd5ec/download https://repositorio.concytec.gob.pe/bitstreams/703656c7-eab4-4e67-90e8-42fffb90c2ae/download |
bitstream.checksum.fl_str_mv |
9b8cb1a7adc9f08ea24c1e27bfce48a2 23e03b6c41ea76d3eeab33afe686f7ba 57c00f8c8884280747dd839df2a3a363 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositorio Institucional CONCYTEC |
repository.mail.fl_str_mv |
repositorio@concytec.gob.pe |
_version_ |
1839175751607255040 |
spelling |
Publicationrp06058600rp01495600rp06057600rp01493600Rebaza T.D.Ludeña Y.Samolski I.Villena G.K.2024-05-30T23:13:38Z2024-05-30T23:13:38Z2020Rebaza, T. D., Ludeña, Y., Samolski, I., & Villena, G. K. (2020). Gene Expression Analysis of Non-Clinical Strain of Aspergillus fumigatus (LMB-35Aa): Does Biofilm Affect Virulence? Journal of Fungi, 6(4), 376. https://doi.org/10.3390/jof6040376https://hdl.handle.net/20.500.12390/2436https://doi.org/10.3390/jof60403762-s2.0-85098133691Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and biofilms developed on polyester cloth and polystyrene microplates. For this, virulence-related genes reported for the clinical strain Af293 were searched in A. fumigatus LMB 35-Aa genome, and 15 genes were identified including those for the synthesis of cell wall components, hydrophobins, invasins, efflux transporters, mycotoxins and regulators. When compared with planktonic cultures at 37?C, invasin gene calA was upregulated in both types of biofilm and efflux transporter genes mdr4 and atrF were predominantly upregulated in biofilms on polystyrene, while aspHs and ftmA were upregulated only in biofilms formed on polyester. Regarding the transcription regulators, laeA was downregulated in biofilms, and medA did not show a significant change. The effect of temperature was also evaluated by comparing the biofilms grown on polyester at 37 vs. 28?C. Non-significant changes at the expression level were found for most genes evaluated, except for atrF, gliZ and medA, which were significantly downregulated at 37?C. According to these results, virulence appears to depend on the interaction of several factors in addition to biofilms and growth temperature. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengMDPI AGJournal of Fungiinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/VirulenceAspergillus fumigatus-1Aspergillus fumigatus-1Biofilms-1Gene expression-1http://purl.org/pe-repo/ocde/ford#4.04.02-1Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?info:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTECORIGINALGene Expression-Journal of Fungi.pdfGene Expression-Journal of Fungi.pdfapplication/pdf1121099https://repositorio.concytec.gob.pe/bitstreams/9e07e5e1-f14b-4274-a184-9259667e2f10/download9b8cb1a7adc9f08ea24c1e27bfce48a2MD51TEXTGene Expression-Journal of Fungi.pdf.txtGene Expression-Journal of Fungi.pdf.txtExtracted texttext/plain53500https://repositorio.concytec.gob.pe/bitstreams/6b6e5779-f583-481e-bf70-7406a89bd5ec/download23e03b6c41ea76d3eeab33afe686f7baMD52THUMBNAILGene Expression-Journal of Fungi.pdf.jpgGene Expression-Journal of Fungi.pdf.jpgGenerated Thumbnailimage/jpeg5450https://repositorio.concytec.gob.pe/bitstreams/703656c7-eab4-4e67-90e8-42fffb90c2ae/download57c00f8c8884280747dd839df2a3a363MD5320.500.12390/2436oai:repositorio.concytec.gob.pe:20.500.12390/24362025-01-17 22:00:35.704https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2info:eu-repo/semantics/openAccessopen accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="cc2a0d73-128b-4c01-8145-ef11080e336a"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Gene expression analysis of non-clinical strain of aspergillus fumigatus (LMB-35AA): Does biofilm affect virulence?</Title> <PublishedIn> <Publication> <Title>Journal of Fungi</Title> </Publication> </PublishedIn> <PublicationDate>2020</PublicationDate> <DOI>https://doi.org/10.3390/jof6040376</DOI> <SCP-Number>2-s2.0-85098133691</SCP-Number> <Authors> <Author> <DisplayName>Rebaza T.D.</DisplayName> <Person id="rp06058" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Ludeña Y.</DisplayName> <Person id="rp01495" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Samolski I.</DisplayName> <Person id="rp06057" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Villena G.K.</DisplayName> <Person id="rp01493" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>MDPI AG</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>https://creativecommons.org/licenses/by-nc-nd/4.0/</License> <Keyword>Virulence</Keyword> <Keyword>Aspergillus fumigatus</Keyword> <Keyword>Aspergillus fumigatus</Keyword> <Keyword>Biofilms</Keyword> <Keyword>Gene expression</Keyword> <Abstract>Aspergillus fumigatus LMB-35Aa, a saprophytic fungus, was used for cellulase production through biofilms cultures. Since biofilms usually favor virulence in clinical strains, the expression of the related genes of the LMB 35-Aa strain was analyzed by qPCR from the biomass of planktonic cultures and biofilms developed on polyester cloth and polystyrene microplates. For this, virulence-related genes reported for the clinical strain Af293 were searched in A. fumigatus LMB 35-Aa genome, and 15 genes were identified including those for the synthesis of cell wall components, hydrophobins, invasins, efflux transporters, mycotoxins and regulators. When compared with planktonic cultures at 37?C, invasin gene calA was upregulated in both types of biofilm and efflux transporter genes mdr4 and atrF were predominantly upregulated in biofilms on polystyrene, while aspHs and ftmA were upregulated only in biofilms formed on polyester. Regarding the transcription regulators, laeA was downregulated in biofilms, and medA did not show a significant change. The effect of temperature was also evaluated by comparing the biofilms grown on polyester at 37 vs. 28?C. Non-significant changes at the expression level were found for most genes evaluated, except for atrF, gliZ and medA, which were significantly downregulated at 37?C. According to these results, virulence appears to depend on the interaction of several factors in addition to biofilms and growth temperature. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1 |
score |
13.44227 |
Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).