Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru

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The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N50 and L50 values of 293 kbp and 9, respectively....

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Detalles Bibliográficos
Autores: Ormeño-Orrillo E., Aguilar-Cuba Y., Zúñiga-Dávila D.
Formato: artículo
Fecha de Publicación:2018
Institución:Consejo Nacional de Ciencia Tecnología e Innovación
Repositorio:CONCYTEC-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.concytec.gob.pe:20.500.12390/2771
Enlace del recurso:https://hdl.handle.net/20.500.12390/2771
https://doi.org/10.1128/genomeA.00241-18
Nivel de acceso:acceso abierto
Materia:Molecular Biology
Genetics
http://purl.org/pe-repo/ocde/ford#3.03.08
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spelling Publicationrp06531600rp07411600rp05672600Ormeño-Orrillo E.Aguilar-Cuba Y.Zúñiga-Dávila D.2024-05-30T23:13:38Z2024-05-30T23:13:38Z2018https://hdl.handle.net/20.500.12390/2771https://doi.org/10.1128/genomeA.00241-182-s2.0-85047555584The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N50 and L50 values of 293 kbp and 9, respectively. The genome contained 6,312 coding sequence (CDS) genes and 52 RNA genes (49 tRNAs and 3 rRNAs). © 2018 Ormeño-Orrillo et al.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengAmerican Society for MicrobiologyGenome Announcementsinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/Molecular BiologyGenetics-1http://purl.org/pe-repo/ocde/ford#3.03.08-1Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peruinfo:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTEC20.500.12390/2771oai:repositorio.concytec.gob.pe:20.500.12390/27712024-05-30 16:11:14.741https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_14cbinfo:eu-repo/semantics/closedAccessmetadata only accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="8ea088b5-2386-43b3-9dd7-2638f004a876"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru</Title> <PublishedIn> <Publication> <Title>Genome Announcements</Title> </Publication> </PublishedIn> <PublicationDate>2018</PublicationDate> <DOI>https://doi.org/10.1128/genomeA.00241-18</DOI> <SCP-Number>2-s2.0-85047555584</SCP-Number> <Authors> <Author> <DisplayName>Ormeño-Orrillo E.</DisplayName> <Person id="rp06531" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Aguilar-Cuba Y.</DisplayName> <Person id="rp07411" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Zúñiga-Dávila D.</DisplayName> <Person id="rp05672" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>American Society for Microbiology</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>https://creativecommons.org/licenses/by-nc-nd/4.0/</License> <Keyword>Molecular Biology</Keyword> <Keyword>Genetics</Keyword> <Abstract>The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N50 and L50 values of 293 kbp and 9, respectively. The genome contained 6,312 coding sequence (CDS) genes and 52 RNA genes (49 tRNAs and 3 rRNAs). © 2018 Ormeño-Orrillo et al.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1
dc.title.none.fl_str_mv Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
title Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
spellingShingle Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
Ormeño-Orrillo E.
Molecular Biology
Genetics
http://purl.org/pe-repo/ocde/ford#3.03.08
title_short Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
title_full Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
title_fullStr Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
title_full_unstemmed Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
title_sort Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
author Ormeño-Orrillo E.
author_facet Ormeño-Orrillo E.
Aguilar-Cuba Y.
Zúñiga-Dávila D.
author_role author
author2 Aguilar-Cuba Y.
Zúñiga-Dávila D.
author2_role author
author
dc.contributor.author.fl_str_mv Ormeño-Orrillo E.
Aguilar-Cuba Y.
Zúñiga-Dávila D.
dc.subject.none.fl_str_mv Molecular Biology
topic Molecular Biology
Genetics
http://purl.org/pe-repo/ocde/ford#3.03.08
dc.subject.es_PE.fl_str_mv Genetics
dc.subject.ocde.none.fl_str_mv http://purl.org/pe-repo/ocde/ford#3.03.08
description The genome sequence of Rhizobium sophoriradicis H4, a nitrogen-fixing bacterium isolated from the common bean (Phaseolus vulgaris) in Peru, is reported here. The genome assembly revealed a 6.44-Mbp genome which was distributed into 95 contigs, with N50 and L50 values of 293 kbp and 9, respectively. The genome contained 6,312 coding sequence (CDS) genes and 52 RNA genes (49 tRNAs and 3 rRNAs). © 2018 Ormeño-Orrillo et al.
publishDate 2018
dc.date.accessioned.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.available.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.issued.fl_str_mv 2018
dc.type.none.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12390/2771
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1128/genomeA.00241-18
dc.identifier.scopus.none.fl_str_mv 2-s2.0-85047555584
url https://hdl.handle.net/20.500.12390/2771
https://doi.org/10.1128/genomeA.00241-18
identifier_str_mv 2-s2.0-85047555584
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv Genome Announcements
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.none.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.publisher.none.fl_str_mv American Society for Microbiology
publisher.none.fl_str_mv American Society for Microbiology
dc.source.none.fl_str_mv reponame:CONCYTEC-Institucional
instname:Consejo Nacional de Ciencia Tecnología e Innovación
instacron:CONCYTEC
instname_str Consejo Nacional de Ciencia Tecnología e Innovación
instacron_str CONCYTEC
institution CONCYTEC
reponame_str CONCYTEC-Institucional
collection CONCYTEC-Institucional
repository.name.fl_str_mv Repositorio Institucional CONCYTEC
repository.mail.fl_str_mv repositorio@concytec.gob.pe
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score 13.362745
Draft genome sequence of Rhizobium sophoriradicis H4, a nitrogenfixing bacterium associated with the leguminous plant Phaseolus vulgaris on the coast of Peru
Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).

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