A digital image may contain objects that can be made up of multiple regions concerning different material properties, physical or chemical attributes. Thus, segmented simplicial meshes with non-manifold boundaries are generated to represent the partitioned regions. We focus on repairing non-manifold boundaries. Current methods modify the topology, geometry or both, using their own data structures. The problem of modifying the topology is that if the mesh has to be post-processed, for instance with the Delaunay refinement, the mesh becomes unsuitable. In this paper, we propose alternatives to repair non-manifold boundaries of segmented simplicial meshes, among them is the Delaunay based one, we use common data structures and only consider 2 and 3 dimensions. We developed algorithms for this purpose, composed of the following tools: relabeling, point insertion and simulated annealing. Thes...