Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach
Descripción del Articulo
Carrion's disease, caused by the bacterium Bartonella bacilliformis, is a serious public health problem in Peru, Ecuador and Colombia. Currently there is no available vaccine against B. bacilliformis. While antibiotics are the standard treatment, resistant strains have been reported, and there...
| Autores: | , , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2024 |
| Institución: | Universidad Nacional Mayor de San Marcos |
| Repositorio: | UNMSM-Tesis |
| Lenguaje: | inglés |
| OAI Identifier: | oai:cybertesis.unmsm.edu.pe:20.500.12672/27424 |
| Enlace del recurso: | https://hdl.handle.net/20.500.12672/27424 https://doi.org/10.1016/j.compbiomed.2024.109397 |
| Nivel de acceso: | acceso abierto |
| Materia: | Multiepítopo Vacuna Inmunoinformática Bartonella bacilliformis https://purl.org/pe-repo/ocde/ford#1.06.03 |
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Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach |
| title |
Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach |
| spellingShingle |
Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach Rivera-Asencios, Damaris Multiepítopo Vacuna Inmunoinformática Bartonella bacilliformis https://purl.org/pe-repo/ocde/ford#1.06.03 |
| title_short |
Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach |
| title_full |
Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach |
| title_fullStr |
Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach |
| title_full_unstemmed |
Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach |
| title_sort |
Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach |
| author |
Rivera-Asencios, Damaris |
| author_facet |
Rivera-Asencios, Damaris Espinoza-Culupú, Abraham Carmen-Sifuentes, Sheyla Ramirez, Pablo García-de-la-Guarda, Ruth |
| author_role |
author |
| author2 |
Espinoza-Culupú, Abraham Carmen-Sifuentes, Sheyla Ramirez, Pablo García-de-la-Guarda, Ruth |
| author2_role |
author author author author |
| dc.contributor.author.fl_str_mv |
Rivera-Asencios, Damaris Espinoza-Culupú, Abraham Carmen-Sifuentes, Sheyla Ramirez, Pablo García-de-la-Guarda, Ruth |
| dc.subject.none.fl_str_mv |
Multiepítopo Vacuna Inmunoinformática Bartonella bacilliformis |
| topic |
Multiepítopo Vacuna Inmunoinformática Bartonella bacilliformis https://purl.org/pe-repo/ocde/ford#1.06.03 |
| dc.subject.ocde.none.fl_str_mv |
https://purl.org/pe-repo/ocde/ford#1.06.03 |
| description |
Carrion's disease, caused by the bacterium Bartonella bacilliformis, is a serious public health problem in Peru, Ecuador and Colombia. Currently there is no available vaccine against B. bacilliformis. While antibiotics are the standard treatment, resistant strains have been reported, and there is a potential spread of the vector that transmits the bacteria. This study aimed to design a multi-epitope vaccine candidate against the causative agent of Carrion's disease using immunoinformatics tools. Predictions of B-cell epitopes, as well as CD4+ and CD8+T cell epitopes, were performed from the entire proteome of B. bacilliformis KC583 using the most frequent alleles from Peru, Ecuador, Colombia, and worldwide. B-cell epitopes and T-cell nested epitopes from outer membrane and virulence-associated proteins were selected. Epitopes were filtered out based on promiscuity, non-allergenicity, conservation, non-homology and non-toxicity. Two vaccine constructs were assembled using linkers. The tertiary structure of the constructs was predicted, and their stability was evaluated through molecular dynamics simulations. The most stable construct was selected for molecular docking with the TLR4 receptor. This study proposes a vaccine construct evaluated in silico as a potential vaccine candidate against Bartonella bacilliformis. |
| publishDate |
2024 |
| dc.date.accessioned.none.fl_str_mv |
2025-09-19T14:34:22Z |
| dc.date.available.none.fl_str_mv |
2025-09-19T14:34:22Z |
| dc.date.issued.fl_str_mv |
2024-11-20 |
| dc.type.none.fl_str_mv |
info:eu-repo/semantics/article |
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article |
| dc.identifier.citation.none.fl_str_mv |
Rivera-Asencios, D., Espinoza-Culupú, A., Carmen-Sifuentes, S., Ramirez, P., & García-de-la-Guarda, R. (2025). Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach. Computers in Biology and Medicine, 184, 109397. https://doi.org/10.1016/j.compbiomed.2024.109397 |
| dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12672/27424 |
| dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1016/j.compbiomed.2024.109397 |
| identifier_str_mv |
Rivera-Asencios, D., Espinoza-Culupú, A., Carmen-Sifuentes, S., Ramirez, P., & García-de-la-Guarda, R. (2025). Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach. Computers in Biology and Medicine, 184, 109397. https://doi.org/10.1016/j.compbiomed.2024.109397 |
| url |
https://hdl.handle.net/20.500.12672/27424 https://doi.org/10.1016/j.compbiomed.2024.109397 |
| dc.language.iso.none.fl_str_mv |
eng |
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eng |
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Vol. 184 |
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info:eu-repo/semantics/openAccess |
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https://creativecommons.org/licenses/by/4.0/ |
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openAccess |
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https://creativecommons.org/licenses/by/4.0/ |
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application/pdf |
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Computers in Biology and Medicine |
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Computers in Biology and Medicine |
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Rivera-Asencios, DamarisEspinoza-Culupú, AbrahamCarmen-Sifuentes, SheylaRamirez, PabloGarcía-de-la-Guarda, Ruth2025-09-19T14:34:22Z2025-09-19T14:34:22Z2024-11-20Rivera-Asencios, D., Espinoza-Culupú, A., Carmen-Sifuentes, S., Ramirez, P., & García-de-la-Guarda, R. (2025). Design of a multi-epitope vaccine candidate against carrion disease by immunoinformatics approach. Computers in Biology and Medicine, 184, 109397. https://doi.org/10.1016/j.compbiomed.2024.109397https://hdl.handle.net/20.500.12672/27424https://doi.org/10.1016/j.compbiomed.2024.109397Carrion's disease, caused by the bacterium Bartonella bacilliformis, is a serious public health problem in Peru, Ecuador and Colombia. Currently there is no available vaccine against B. bacilliformis. While antibiotics are the standard treatment, resistant strains have been reported, and there is a potential spread of the vector that transmits the bacteria. This study aimed to design a multi-epitope vaccine candidate against the causative agent of Carrion's disease using immunoinformatics tools. Predictions of B-cell epitopes, as well as CD4+ and CD8+T cell epitopes, were performed from the entire proteome of B. bacilliformis KC583 using the most frequent alleles from Peru, Ecuador, Colombia, and worldwide. B-cell epitopes and T-cell nested epitopes from outer membrane and virulence-associated proteins were selected. Epitopes were filtered out based on promiscuity, non-allergenicity, conservation, non-homology and non-toxicity. Two vaccine constructs were assembled using linkers. The tertiary structure of the constructs was predicted, and their stability was evaluated through molecular dynamics simulations. The most stable construct was selected for molecular docking with the TLR4 receptor. This study proposes a vaccine construct evaluated in silico as a potential vaccine candidate against Bartonella bacilliformis.Perú. Universidad Nacional Mayor de San Marcos. Vicerrectorado de Investigación y Posgrado. Programa de Promoción de Trabajo de Investigación para optar al grado académico de Bachiller. 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La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).