Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata

Descripción del Articulo

Universidad Nacional Agraria La Molina. Escuela de Posgrado. Maestría en Producción Animal
Detalles Bibliográficos
Autores: Paredes, G. F., Yalta-Macedo, C. E., Gutierrez, G. A., Veli-Rivera, E. A.
Formato: artículo
Fecha de Publicación:2020
Institución:Universidad Nacional Agraria La Molina
Repositorio:UNALM-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.lamolina.edu.pe:20.500.12996/5040
Enlace del recurso:https://hdl.handle.net/20.500.12996/5040
https://doi.org/10.3390/genes11050541
Nivel de acceso:acceso abierto
Materia:Llama
Recursos genéticos
Colecciones de material genético
Biodiversidad
Marcadores genéticos
Microsatélites
Fenotipos
Variación genética
Evaluación
Perú
Centro Experimental ILLPA - INIA
https://purl.org/pe-repo/ocde/ford#4.02.01
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dc.title.en_US.fl_str_mv Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
title Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
spellingShingle Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
Paredes, G. F.
Llama
Recursos genéticos
Colecciones de material genético
Biodiversidad
Marcadores genéticos
Microsatélites
Fenotipos
Variación genética
Evaluación
Perú
Centro Experimental ILLPA - INIA
https://purl.org/pe-repo/ocde/ford#4.02.01
title_short Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
title_full Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
title_fullStr Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
title_full_unstemmed Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
title_sort Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
author Paredes, G. F.
author_facet Paredes, G. F.
Yalta-Macedo, C. E.
Gutierrez, G. A.
Veli-Rivera, E. A.
author_role author
author2 Yalta-Macedo, C. E.
Gutierrez, G. A.
Veli-Rivera, E. A.
author2_role author
author
author
dc.contributor.author.fl_str_mv Paredes, G. F.
Yalta-Macedo, C. E.
Gutierrez, G. A.
Veli-Rivera, E. A.
dc.subject.es_PE.fl_str_mv Llama
Recursos genéticos
Colecciones de material genético
Biodiversidad
Marcadores genéticos
Microsatélites
Fenotipos
Variación genética
Evaluación
Perú
Centro Experimental ILLPA - INIA
topic Llama
Recursos genéticos
Colecciones de material genético
Biodiversidad
Marcadores genéticos
Microsatélites
Fenotipos
Variación genética
Evaluación
Perú
Centro Experimental ILLPA - INIA
https://purl.org/pe-repo/ocde/ford#4.02.01
dc.subject.ocde.es_PE.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.02.01
description Universidad Nacional Agraria La Molina. Escuela de Posgrado. Maestría en Producción Animal
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2021-11-11T20:08:11Z
dc.date.available.none.fl_str_mv 2021-11-11T20:08:11Z
dc.date.issued.fl_str_mv 2020
dc.type.en_US.fl_str_mv info:eu-repo/semantics/article
dc.type.version.en_US.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.citation.es_PE.fl_str_mv Paredes, G.F.; Yalta-Macedo, C.E.; Gutierrez, G.A.; Veli-Rivera, E.A. (2020). Genetic Diversity and Population Structure of Llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata. Genes 2020, 11, 541. https://doi.org/10.3390/genes11050541
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12996/5040
dc.identifier.doi.es_PE.fl_str_mv https://doi.org/10.3390/genes11050541
identifier_str_mv Paredes, G.F.; Yalta-Macedo, C.E.; Gutierrez, G.A.; Veli-Rivera, E.A. (2020). Genetic Diversity and Population Structure of Llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata. Genes 2020, 11, 541. https://doi.org/10.3390/genes11050541
url https://hdl.handle.net/20.500.12996/5040
https://doi.org/10.3390/genes11050541
dc.language.iso.es_PE.fl_str_mv eng
language eng
dc.rights.en_US.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.en_US.fl_str_mv application/pdf
dc.publisher.es_PE.fl_str_mv MDPI
dc.publisher.country.es_PE.fl_str_mv CH
dc.source.es_PE.fl_str_mv https://www.mdpi.com/2073-4425/11/5/541
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instname_str Universidad Nacional Agraria La Molina
instacron_str UNALM
institution UNALM
reponame_str UNALM-Institucional
collection UNALM-Institucional
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spelling 7acfc756-3504-486a-abbc-324d20c6cda9a15f8f7e-039a-4b8e-abac-89e386954dcbac478a3d-a7b6-42bb-a0d3-0075d92c27e23b87b72b-fc20-4bc4-b97e-6e17daa506d5Paredes, G. F.Yalta-Macedo, C. E.Gutierrez, G. A.Veli-Rivera, E. A.2021-11-11T20:08:11Z2021-11-11T20:08:11Z2020Paredes, G.F.; Yalta-Macedo, C.E.; Gutierrez, G.A.; Veli-Rivera, E.A. (2020). Genetic Diversity and Population Structure of Llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata. Genes 2020, 11, 541. https://doi.org/10.3390/genes11050541https://hdl.handle.net/20.500.12996/5040https://doi.org/10.3390/genes11050541Universidad Nacional Agraria La Molina. Escuela de Posgrado. Maestría en Producción AnimalLlamas (Lama glama) are invaluable resources of Peru. Despite their importance, their population is decreasing. The Camelid Germplasm Bank—Quimsachata was created as a guardian of this South American camelid (SAC) species and established a bank of llamas from their two types, Ch’aku and Q’ara. However, these populations need to present high genetic diversity to be considered suitable conservation stocks. Thus, in the present study, 13 microsatellites specific for the SAC were used to assess the current genetic variability and differentiation of the llama population from the Bank. The global population showed high genetic diversity with a total of 157 different alleles, with an average of 12.08 alleles per microsatellite, an expected and observed heterozygosity of 0.758 and 0.707, respectively, and an average polymorphic information content (PIC) of 0.723. Although considered as two different breeds and managed separately, the genetic differentiation between Ch’aku and Q’ara was low (FST = 0.01). Accordingly, the gene flow value was high (Nm = 30.5). Overall, our results indicate the existence of high genetic variation among individuals, and thus, this llama population could be considered a suitable genetic stock for their conservation and for sustainability programs. Additionally, the 13 microsatellites can be used to study other Peruvian llama populations and monitor the genetic variability of llamas from the Camelid Germplasm Bank—Quimsachata.application/pdfengMDPICHinfo:eu-repo/semantics/openAccesshttps://www.mdpi.com/2073-4425/11/5/541reponame:UNALM-Institucionalinstname:Universidad Nacional Agraria La Molinainstacron:UNALMLlamaRecursos genéticosColecciones de material genéticoBiodiversidadMarcadores genéticosMicrosatélitesFenotiposVariación genéticaEvaluaciónPerúCentro Experimental ILLPA - INIAhttps://purl.org/pe-repo/ocde/ford#4.02.01Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachatainfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionLICENSElicense.txtlicense.txttext/plain; charset=utf-81664https://repositorio.lamolina.edu.pe/bitstreams/9bdf10ef-d258-415a-9f34-0cbaa9587cba/download97c5bee00fbb4c4f8867bd742b579336MD52ORIGINALparedes-yalta-gutierrez-veli.pdfparedes-yalta-gutierrez-veli.pdfTexto completoapplication/pdf928627https://repositorio.lamolina.edu.pe/bitstreams/b7e0c18a-1efb-4653-9939-b1d95751d1c2/download80dfeea9639d4608d9b831b2acb78240MD51TEXTparedes-yalta-gutierrez-veli.pdf.txtparedes-yalta-gutierrez-veli.pdf.txtExtracted texttext/plain45810https://repositorio.lamolina.edu.pe/bitstreams/d367b2e2-b03c-4e58-aa6b-71370ffe9365/download19c1fb83ed2d2fa6e00c8d0372ae6626MD53THUMBNAILparedes-yalta-gutierrez-veli.pdf.jpgparedes-yalta-gutierrez-veli.pdf.jpgGenerated Thumbnailimage/jpeg4456https://repositorio.lamolina.edu.pe/bitstreams/5e016e96-8366-4c78-bb1e-5b594e056769/download958f2fd2fe0d611e92ab7c6dde1df2abMD5420.500.12996/5040oai:repositorio.lamolina.edu.pe:20.500.12996/50402023-01-05 04:33:00.757open.accesshttps://repositorio.lamolina.edu.peRepositorio Universidad Nacional Agraria La Molinadspace@lamolina.edu.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Genetic diversity and population structure of llamas (Lama glama) from the Camelid Germplasm Bank—Quimsachata
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