Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species

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Tillandsia marconae Till & Vitek (Bromeliaceae) is a rare plant native species that grows over sand, in the coastal desert from Perú and Chile and is considered an endangered species. In this study, we assembled its chloroplast genome. The draft chloroplast genome of T. marconae is ca. 158,873 b...

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Detalles Bibliográficos
Autores: Chávez Galarza, Julio César, Cardenas Ninasivincha, Stefanny, Contreras, Roberto, Ferro Mauricio, Rubén Darío, Huanca Mamani, Wilson
Formato: artículo
Fecha de Publicación:2021
Institución:Instituto Nacional de Innovación Agraria
Repositorio:INIA-Institucional
Lenguaje:inglés
OAI Identifier:oai:null:20.500.12955/1661
Enlace del recurso:https://hdl.handle.net/20.500.12955/1661
https://doi.org/10.1080/23802359.2021.1944364
Nivel de acceso:acceso abierto
Materia:Chloroplast genome
Tillandsia
https://purl.org/pe-repo/ocde/ford#4.04.00
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dc.title.es_PE.fl_str_mv Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
title Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
spellingShingle Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
Chávez Galarza, Julio César
Chloroplast genome
Tillandsia
https://purl.org/pe-repo/ocde/ford#4.04.00
title_short Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
title_full Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
title_fullStr Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
title_full_unstemmed Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
title_sort Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
author Chávez Galarza, Julio César
author_facet Chávez Galarza, Julio César
Cardenas Ninasivincha, Stefanny
Contreras, Roberto
Ferro Mauricio, Rubén Darío
Huanca Mamani, Wilson
author_role author
author2 Cardenas Ninasivincha, Stefanny
Contreras, Roberto
Ferro Mauricio, Rubén Darío
Huanca Mamani, Wilson
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Chávez Galarza, Julio César
Cardenas Ninasivincha, Stefanny
Contreras, Roberto
Ferro Mauricio, Rubén Darío
Huanca Mamani, Wilson
dc.subject.es_PE.fl_str_mv Chloroplast genome
Tillandsia
topic Chloroplast genome
Tillandsia
https://purl.org/pe-repo/ocde/ford#4.04.00
dc.subject.ocde.es_PE.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.04.00
description Tillandsia marconae Till & Vitek (Bromeliaceae) is a rare plant native species that grows over sand, in the coastal desert from Perú and Chile and is considered an endangered species. In this study, we assembled its chloroplast genome. The draft chloroplast genome of T. marconae is ca. 158,873 bp in length, containing a large single-copy region of 86,937 bp, a small single-copy region of 18,506 bp, and a pair of inverted repeat regions of 26,715 bp. The GC content of the draft chloroplast genome is 37.4%. It encodes a total of 135 genes, including 86 protein-coding genes, 38 tRNA genes, 8 rRNA genes, and three pseudogenes. The phylogenetic tree indicated that T. marconae is placed within the Bromeliaceae family and a close relationship with Tillandsia usneoides with 100% support.
publishDate 2021
dc.date.accessioned.none.fl_str_mv 2022-04-13T21:16:54Z
dc.date.available.none.fl_str_mv 2022-04-13T21:16:54Z
dc.date.issued.fl_str_mv 2021-08-20
dc.type.es_PE.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.es_PE.fl_str_mv Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species. Mitochondrial DNA Part B 2021, VOL. 6, NO. 9, 2562–2564. doi: 10.1080/23802359.2021.1944364
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12955/1661
dc.identifier.journal.es_PE.fl_str_mv Mitochondrial DNA Part B
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1080/23802359.2021.1944364
identifier_str_mv Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species. Mitochondrial DNA Part B 2021, VOL. 6, NO. 9, 2562–2564. doi: 10.1080/23802359.2021.1944364
Mitochondrial DNA Part B
url https://hdl.handle.net/20.500.12955/1661
https://doi.org/10.1080/23802359.2021.1944364
dc.language.iso.es_PE.fl_str_mv eng
language eng
dc.relation.ispartof.es_PE.fl_str_mv Mitochondrial DNA Part B 2021, VOL. 6, NO. 9, 2562–2564
dc.relation.publisherversion.es_PE.fl_str_mv https://doi.org/10.1080/23802359.2021.1944364
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eu_rights_str_mv openAccess
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dc.coverage.spatial.es_PE.fl_str_mv Perú
dc.publisher.es_PE.fl_str_mv Taylor & Francis
dc.publisher.country.es_PE.fl_str_mv Reino Unido
dc.source.es_PE.fl_str_mv Instituto Nacional de Innovación Agraria
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spelling Chávez Galarza, Julio CésarCardenas Ninasivincha, StefannyContreras, RobertoFerro Mauricio, Rubén DaríoHuanca Mamani, WilsonPerú2022-04-13T21:16:54Z2022-04-13T21:16:54Z2021-08-20Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species. Mitochondrial DNA Part B 2021, VOL. 6, NO. 9, 2562–2564. doi: 10.1080/23802359.2021.1944364https://hdl.handle.net/20.500.12955/1661Mitochondrial DNA Part Bhttps://doi.org/10.1080/23802359.2021.1944364Tillandsia marconae Till & Vitek (Bromeliaceae) is a rare plant native species that grows over sand, in the coastal desert from Perú and Chile and is considered an endangered species. In this study, we assembled its chloroplast genome. The draft chloroplast genome of T. marconae is ca. 158,873 bp in length, containing a large single-copy region of 86,937 bp, a small single-copy region of 18,506 bp, and a pair of inverted repeat regions of 26,715 bp. The GC content of the draft chloroplast genome is 37.4%. It encodes a total of 135 genes, including 86 protein-coding genes, 38 tRNA genes, 8 rRNA genes, and three pseudogenes. The phylogenetic tree indicated that T. marconae is placed within the Bromeliaceae family and a close relationship with Tillandsia usneoides with 100% support.application/pdfengTaylor & FrancisReino UnidoMitochondrial DNA Part B 2021, VOL. 6, NO. 9, 2562–2564https://doi.org/10.1080/23802359.2021.1944364info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/4.0/Instituto Nacional de Innovación AgrariaRepositorio Institucional - INIAreponame:INIA-Institucionalinstname:Instituto Nacional de Innovación Agrariainstacron:INIAChloroplast genomeTillandsiahttps://purl.org/pe-repo/ocde/ford#4.04.00Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered speciesinfo:eu-repo/semantics/articleLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.inia.gob.pe/bitstreams/57702a3e-62b4-4b5f-9e6c-94d5337251c7/download8a4605be74aa9ea9d79846c1fba20a33MD52TEXTChloroplast genome of Tillandsia marconae till Vitek 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Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
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