Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species

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Background Loche (Cucurbita moschata) is a pre-Columbian squash that is cultivated exclusively in the northern coast of Peru, Lambayeque. This crop is notable for the presence of warts in its skin and for its vegetative reproduction as it commonly lacks of seeds in fruits. Currently, loche may be co...

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Detalles Bibliográficos
Autores: Saldaña Serrano, Carla Liset, Estrada Cañari, Richard, Suca, Esther, Cruz Grimaldo, Camila Leandra, Vilcara, Edgardo, Arbizu Berrocal, Carlos Irvin
Formato: artículo
Fecha de Publicación:2024
Institución:Instituto Nacional de Innovación Agraria
Repositorio:INIA-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.inia.gob.pe:20.500.12955/2661
Enlace del recurso:http://hdl.handle.net/20.500.12955/2661
Nivel de acceso:acceso abierto
Materia:Cucurbitaceae
genomics
Lambayeque
genetic resources
genome
next-generation sequencing
https://purl.org/pe-repo/ocde/ford#4.01.01
Cucurbitaceae; genómica; Lambayeque; recursos genéticos; genoma; secuenciación de próxima generación
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dc.title.none.fl_str_mv Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
title Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
spellingShingle Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
Saldaña Serrano, Carla Liset
Cucurbitaceae
genomics
Lambayeque
genetic resources
genome
next-generation sequencing
https://purl.org/pe-repo/ocde/ford#4.01.01
Cucurbitaceae; genómica; Lambayeque; recursos genéticos; genoma; secuenciación de próxima generación
title_short Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
title_full Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
title_fullStr Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
title_full_unstemmed Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
title_sort Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
author Saldaña Serrano, Carla Liset
author_facet Saldaña Serrano, Carla Liset
Estrada Cañari, Richard
Suca, Esther
Cruz Grimaldo, Camila Leandra
Vilcara, Edgardo
Arbizu Berrocal, Carlos Irvin
author_role author
author2 Estrada Cañari, Richard
Suca, Esther
Cruz Grimaldo, Camila Leandra
Vilcara, Edgardo
Arbizu Berrocal, Carlos Irvin
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Saldaña Serrano, Carla Liset
Estrada Cañari, Richard
Suca, Esther
Cruz Grimaldo, Camila Leandra
Vilcara, Edgardo
Arbizu Berrocal, Carlos Irvin
dc.subject.none.fl_str_mv Cucurbitaceae
genomics
Lambayeque
genetic resources
genome
next-generation sequencing
topic Cucurbitaceae
genomics
Lambayeque
genetic resources
genome
next-generation sequencing
https://purl.org/pe-repo/ocde/ford#4.01.01
Cucurbitaceae; genómica; Lambayeque; recursos genéticos; genoma; secuenciación de próxima generación
dc.subject.ocde.none.fl_str_mv https://purl.org/pe-repo/ocde/ford#4.01.01
dc.subject.agrovoc.none.fl_str_mv Cucurbitaceae; genómica; Lambayeque; recursos genéticos; genoma; secuenciación de próxima generación
description Background Loche (Cucurbita moschata) is a pre-Columbian squash that is cultivated exclusively in the northern coast of Peru, Lambayeque. This crop is notable for the presence of warts in its skin and for its vegetative reproduction as it commonly lacks of seeds in fruits. Currently, loche may be considered a new product for international markets, recognizing the gastronomy of Lambayeque in the world and dynamizing the Peruvian agro-export area. However, genomic information about this squash is very limited.
publishDate 2024
dc.date.accessioned.none.fl_str_mv 2025-03-12T19:29:30Z
dc.date.available.none.fl_str_mv 2025-03-12T19:29:30Z
dc.date.issued.fl_str_mv 2024-10-10
dc.type.none.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.none.fl_str_mv Saldaña, C. L., Estrada, R., Suca, E., Cruz, C., Vilcara, E., & Arbizu, C. I. (2024). Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species. https://doi.org/10.21203/rs.3.rs-5034257/v1
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12955/2661
dc.identifier.doi.none.fl_str_mv doi.org/10.21203/rs.3.rs-5034257/v1
identifier_str_mv Saldaña, C. L., Estrada, R., Suca, E., Cruz, C., Vilcara, E., & Arbizu, C. I. (2024). Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species. https://doi.org/10.21203/rs.3.rs-5034257/v1
doi.org/10.21203/rs.3.rs-5034257/v1
url http://hdl.handle.net/20.500.12955/2661
dc.language.iso.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.none.fl_str_mv https://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/4.0/
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Research Square
dc.publisher.country.none.fl_str_mv CH
publisher.none.fl_str_mv Research Square
dc.source.none.fl_str_mv Instituto Nacional de Innovación Agraria
reponame:INIA-Institucional
instname:Instituto Nacional de Innovación Agraria
instacron:INIA
instname_str Instituto Nacional de Innovación Agraria
instacron_str INIA
institution INIA
reponame_str INIA-Institucional
collection INIA-Institucional
dc.source.uri.none.fl_str_mv Repositorio Institucional - INIA
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spelling Saldaña Serrano, Carla LisetEstrada Cañari, RichardSuca, EstherCruz Grimaldo, Camila LeandraVilcara, EdgardoArbizu Berrocal, Carlos Irvin2025-03-12T19:29:30Z2025-03-12T19:29:30Z2024-10-10Saldaña, C. L., Estrada, R., Suca, E., Cruz, C., Vilcara, E., & Arbizu, C. I. (2024). Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species. https://doi.org/10.21203/rs.3.rs-5034257/v1http://hdl.handle.net/20.500.12955/2661doi.org/10.21203/rs.3.rs-5034257/v1Background Loche (Cucurbita moschata) is a pre-Columbian squash that is cultivated exclusively in the northern coast of Peru, Lambayeque. This crop is notable for the presence of warts in its skin and for its vegetative reproduction as it commonly lacks of seeds in fruits. Currently, loche may be considered a new product for international markets, recognizing the gastronomy of Lambayeque in the world and dynamizing the Peruvian agro-export area. However, genomic information about this squash is very limited.This research was funded by the project "Creación del servicio de agricultura de precisión en los Departamentos de Lambayeque, Huancavelica, Ucayali y San Martín 4 Departamentos" of the Ministry of Agrarian Development and Irrigation (MIDAGRI) of the Peruvian Government with grant number CUI 2449640.application/pdfengResearch SquareCHinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/4.0/Instituto Nacional de Innovación Agrariareponame:INIA-Institucionalinstname:Instituto Nacional de Innovación Agrariainstacron:INIARepositorio Institucional - INIACucurbitaceaegenomicsLambayequegenetic resourcesgenomenext-generation sequencinghttps://purl.org/pe-repo/ocde/ford#4.01.01Cucurbitaceae; genómica; Lambayeque; recursos genéticos; genoma; secuenciación de próxima generaciónComplete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative speciesinfo:eu-repo/semantics/articleORIGINALComplet.pdfComplet.pdfapplication/pdf1874925https://repositorio.inia.gob.pe/bitstreams/ccd6a4f2-9928-4d6b-97ef-143dbde72aaa/downloadf05a135b2abe1c60166d08ba6312c4bbMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81792https://repositorio.inia.gob.pe/bitstreams/aa44a6c9-4a83-4f22-b873-65568ae49546/downloada1dff3722e05e29dac20fa1a97a12ccfMD5220.500.12955/2661oai:repositorio.inia.gob.pe:20.500.12955/26612025-03-12 14:29:30.642https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessopen.accesshttps://repositorio.inia.gob.peRepositorio Institucional INIArepositorio@inia.gob.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Complete chloroplast genome of a Peruvian landrace of Cucurbita moschata, loche, and its comparative analysis with other relative species
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