Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
Descripción del Articulo
Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee...
Autores: | , , , , , , , , , , , , |
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Formato: | artículo |
Fecha de Publicación: | 2023 |
Institución: | Instituto Nacional de Innovación Agraria |
Repositorio: | INIA-Institucional |
Lenguaje: | inglés |
OAI Identifier: | oai:null:20.500.12955/2289 |
Enlace del recurso: | https://hdl.handle.net/20.500.12955/2289 https://doi.org/10.1002/csc2.20971 |
Nivel de acceso: | acceso abierto |
Materia: | INIA-CGC, INIA´s coffee germplasm collection ANOVA, analysis of variance GCV, genotypic coefficient of variation PCV, phenotypic coefficient of variation https://purl.org/pe-repo/ocde/ford#4.01.06 Phenotypic variation Variación fenotípica Genotypes Genotipos Coffee Café Coffea arabica |
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dc.title.es_PE.fl_str_mv |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru |
title |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru |
spellingShingle |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru Paredes Espinosa, Richard INIA-CGC, INIA´s coffee germplasm collection ANOVA, analysis of variance GCV, genotypic coefficient of variation PCV, phenotypic coefficient of variation https://purl.org/pe-repo/ocde/ford#4.01.06 Phenotypic variation Variación fenotípica Genotypes Genotipos Coffee Café Coffea arabica |
title_short |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru |
title_full |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru |
title_fullStr |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru |
title_full_unstemmed |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru |
title_sort |
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru |
author |
Paredes Espinosa, Richard |
author_facet |
Paredes Espinosa, Richard Gutiérrez Reynoso, Dina Lida Atoche Garay, Diego Fernando Mansilla Córdova, Pedro Javier Abad Romaní, Yudi Gertrudis Girón Aguilar, Rita Carolina Flores Torres, Itala Montañez Artica, Ana Gabriela Arbizu Berrocal, Carlos Irvin Amasifuen Guerra, Carlos Alberto Maicelo Quintana, Jorge Luis Poemape Tuesta, Carlos Augusto Guerrero Abad, Juan Carlos |
author_role |
author |
author2 |
Gutiérrez Reynoso, Dina Lida Atoche Garay, Diego Fernando Mansilla Córdova, Pedro Javier Abad Romaní, Yudi Gertrudis Girón Aguilar, Rita Carolina Flores Torres, Itala Montañez Artica, Ana Gabriela Arbizu Berrocal, Carlos Irvin Amasifuen Guerra, Carlos Alberto Maicelo Quintana, Jorge Luis Poemape Tuesta, Carlos Augusto Guerrero Abad, Juan Carlos |
author2_role |
author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Paredes Espinosa, Richard Gutiérrez Reynoso, Dina Lida Atoche Garay, Diego Fernando Mansilla Córdova, Pedro Javier Abad Romaní, Yudi Gertrudis Girón Aguilar, Rita Carolina Flores Torres, Itala Montañez Artica, Ana Gabriela Arbizu Berrocal, Carlos Irvin Amasifuen Guerra, Carlos Alberto Maicelo Quintana, Jorge Luis Poemape Tuesta, Carlos Augusto Guerrero Abad, Juan Carlos |
dc.subject.es_PE.fl_str_mv |
INIA-CGC, INIA´s coffee germplasm collection ANOVA, analysis of variance GCV, genotypic coefficient of variation PCV, phenotypic coefficient of variation |
topic |
INIA-CGC, INIA´s coffee germplasm collection ANOVA, analysis of variance GCV, genotypic coefficient of variation PCV, phenotypic coefficient of variation https://purl.org/pe-repo/ocde/ford#4.01.06 Phenotypic variation Variación fenotípica Genotypes Genotipos Coffee Café Coffea arabica |
dc.subject.ocde.es_PE.fl_str_mv |
https://purl.org/pe-repo/ocde/ford#4.01.06 |
dc.subject.agrovoc.es_PE.fl_str_mv |
Phenotypic variation Variación fenotípica Genotypes Genotipos Coffee Café Coffea arabica |
description |
Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance. |
publishDate |
2023 |
dc.date.accessioned.none.fl_str_mv |
2023-08-31T17:37:12Z |
dc.date.available.none.fl_str_mv |
2023-08-31T17:37:12Z |
dc.date.issued.fl_str_mv |
2023-06-06 |
dc.type.es_PE.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
dc.identifier.citation.es_PE.fl_str_mv |
Paredes‐Espinosa, R., Gutiérrez‐Reynoso, D. L., Atoche‐Garay, D., Mansilla‐Córdova, P. J., Abad‐Romaní, Y., Girón‐Aguilar, C., ... & Guerrero‐Abad, J. C. Agro‐morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru. Crop Science. doi: 10.1002/csc2.20971 |
dc.identifier.issn.none.fl_str_mv |
0011-183X |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12955/2289 |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1002/csc2.20971 |
identifier_str_mv |
Paredes‐Espinosa, R., Gutiérrez‐Reynoso, D. L., Atoche‐Garay, D., Mansilla‐Córdova, P. J., Abad‐Romaní, Y., Girón‐Aguilar, C., ... & Guerrero‐Abad, J. C. Agro‐morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru. Crop Science. doi: 10.1002/csc2.20971 0011-183X |
url |
https://hdl.handle.net/20.500.12955/2289 https://doi.org/10.1002/csc2.20971 |
dc.language.iso.es_PE.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.es_PE.fl_str_mv |
urn:issn:0011-183X |
dc.relation.ispartofseries.es_PE.fl_str_mv |
Crop science |
dc.rights.es_PE.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.es_PE.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
dc.format.es_PE.fl_str_mv |
application/pdf |
dc.publisher.es_PE.fl_str_mv |
John Wiley & Sons Inc. |
dc.publisher.country.es_PE.fl_str_mv |
PE |
dc.source.es_PE.fl_str_mv |
Instituto Nacional de Innovación Agraria |
dc.source.none.fl_str_mv |
reponame:INIA-Institucional instname:Instituto Nacional de Innovación Agraria instacron:INIA |
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Instituto Nacional de Innovación Agraria |
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INIA |
institution |
INIA |
reponame_str |
INIA-Institucional |
collection |
INIA-Institucional |
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Repositorio Institucional - INIA |
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Paredes Espinosa, RichardGutiérrez Reynoso, Dina LidaAtoche Garay, Diego FernandoMansilla Córdova, Pedro Javier Abad Romaní, Yudi GertrudisGirón Aguilar, Rita CarolinaFlores Torres, ItalaMontañez Artica, Ana GabrielaArbizu Berrocal, Carlos IrvinAmasifuen Guerra, Carlos AlbertoMaicelo Quintana, Jorge LuisPoemape Tuesta, Carlos AugustoGuerrero Abad, Juan Carlos2023-08-31T17:37:12Z2023-08-31T17:37:12Z2023-06-06Paredes‐Espinosa, R., Gutiérrez‐Reynoso, D. L., Atoche‐Garay, D., Mansilla‐Córdova, P. J., Abad‐Romaní, Y., Girón‐Aguilar, C., ... & Guerrero‐Abad, J. C. Agro‐morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru. Crop Science. doi: 10.1002/csc2.209710011-183Xhttps://hdl.handle.net/20.500.12955/2289https://doi.org/10.1002/csc2.20971Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance.application/pdfengJohn Wiley & Sons Inc.PEurn:issn:0011-183XCrop scienceinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/4.0/Instituto Nacional de Innovación AgrariaRepositorio Institucional - INIAreponame:INIA-Institucionalinstname:Instituto Nacional de Innovación Agrariainstacron:INIAINIA-CGC, INIA´s coffee germplasm collectionANOVA, analysis of varianceGCV, genotypic coefficient of variationPCV, phenotypic coefficient of variationhttps://purl.org/pe-repo/ocde/ford#4.01.06Phenotypic variationVariación fenotípicaGenotypesGenotiposCoffeeCaféCoffea arabicaAgro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peruinfo:eu-repo/semantics/articleORIGINALParedes_et-al_coffee_diversity.pdfParedes_et-al_coffee_diversity.pdfArticle (English)application/pdf1515090https://repositorio.inia.gob.pe/bitstreams/01f7dd84-3287-4dd6-b510-19794182575c/downloadf02cf08a2773f00106429e46363965e4MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.inia.gob.pe/bitstreams/9c3372d4-fa34-4afa-ad5c-9652d840ce57/download8a4605be74aa9ea9d79846c1fba20a33MD52TEXTParedes_et-al_coffee_diversity.pdf.txtParedes_et-al_coffee_diversity.pdf.txtExtracted texttext/plain85099https://repositorio.inia.gob.pe/bitstreams/6074fb98-ad32-421c-9624-ab722fa42988/download5b6d1f01db5e0d5e6bc3087bfe990936MD53THUMBNAILParedes_et-al_coffee_diversity.pdf.jpgParedes_et-al_coffee_diversity.pdf.jpgGenerated Thumbnailimage/jpeg1802https://repositorio.inia.gob.pe/bitstreams/611b2951-0a8e-4bac-b73b-f3984dd6567c/downloadce79efc39b7d5c695b2f2e68b5d47e45MD5420.500.12955/2289oai:repositorio.inia.gob.pe:20.500.12955/22892023-08-31 12:37:13.675https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessopen.accesshttps://repositorio.inia.gob.peRepositorio Institucional INIArepositorio@inia.gob.peTk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo= |
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Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).