Damaging variants in FOXI3 cause microtia and craniofacial microsomia

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Purpose: Craniofacial microsomia (CFM) represents a spectrum of craniofacial malformations, ranging from isolated microtia with or without aural atresia to underdevelopment of the mandible, maxilla, orbit, facial soft tissue, and/or facial nerve. The genetic causes of CFM remain largely unknown. Met...

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Autores: Quiat, Daniel, Timberlake, Andrew T., Curran, Justin J., Cunningham, Michael L., McDonough, Barbara, Artunduaga, Maria A., De Palma, Steven R., Duenas Roque, Milagros M., Gorham, Joshua M., Gustafson, Jonas A., Hamdan, Usama, Hing, Anne V., Hurtado Villa, Paula, Nicolau, Yamileth, Osorno, Gabriel, Pachajoa, Harry, Porras Hurtado, Gloria L., Quintanilla Dieck, Lourdes, Serrano, Luis, Tumblin, Melissa, Zarante, Ignacio, Luquetti, Daniela V., Eavey, Roland D., Heike, Carrie L., Seidman, Jonathan G., Seidman, Christine E.
Formato: artículo
Fecha de Publicación:2023
Institución:Seguro Social de Salud
Repositorio:ESSALUD-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.essalud.gob.pe:20.500.12959/3479
Enlace del recurso:https://hdl.handle.net/20.500.12959/3479
https://doi.org/10.1016/j.gim.2022.09.005
Nivel de acceso:acceso abierto
Materia:Craniofacial microsomia
Ectoderm
FOXI3
Microtia
Neural crest
Microsomía craneofacial
Cresta neural
https://purl.org/pe-repo/ocde/ford#3.02.25
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dc.title.es_PE.fl_str_mv Damaging variants in FOXI3 cause microtia and craniofacial microsomia
dc.title.alternative.es_PE.fl_str_mv Las variantes dañinas en FOXI3 causan microtia y microsomía craneofacial
title Damaging variants in FOXI3 cause microtia and craniofacial microsomia
spellingShingle Damaging variants in FOXI3 cause microtia and craniofacial microsomia
Quiat, Daniel
Craniofacial microsomia
Ectoderm
FOXI3
Microtia
Neural crest
Microsomía craneofacial
Microtia
Cresta neural
https://purl.org/pe-repo/ocde/ford#3.02.25
title_short Damaging variants in FOXI3 cause microtia and craniofacial microsomia
title_full Damaging variants in FOXI3 cause microtia and craniofacial microsomia
title_fullStr Damaging variants in FOXI3 cause microtia and craniofacial microsomia
title_full_unstemmed Damaging variants in FOXI3 cause microtia and craniofacial microsomia
title_sort Damaging variants in FOXI3 cause microtia and craniofacial microsomia
author Quiat, Daniel
author_facet Quiat, Daniel
Timberlake, Andrew T.
Curran, Justin J.
Cunningham, Michael L.
McDonough, Barbara
Artunduaga, Maria A.
De Palma, Steven R.
Duenas Roque, Milagros M.
Gorham, Joshua M.
Gustafson, Jonas A.
Hamdan, Usama
Hing, Anne V.
Hurtado Villa, Paula
Nicolau, Yamileth
Osorno, Gabriel
Pachajoa, Harry
Porras Hurtado, Gloria L.
Quintanilla Dieck, Lourdes
Serrano, Luis
Tumblin, Melissa
Zarante, Ignacio
Luquetti, Daniela V.
Eavey, Roland D.
Heike, Carrie L.
Seidman, Jonathan G.
Seidman, Christine E.
author_role author
author2 Timberlake, Andrew T.
Curran, Justin J.
Cunningham, Michael L.
McDonough, Barbara
Artunduaga, Maria A.
De Palma, Steven R.
Duenas Roque, Milagros M.
Gorham, Joshua M.
Gustafson, Jonas A.
Hamdan, Usama
Hing, Anne V.
Hurtado Villa, Paula
Nicolau, Yamileth
Osorno, Gabriel
Pachajoa, Harry
Porras Hurtado, Gloria L.
Quintanilla Dieck, Lourdes
Serrano, Luis
Tumblin, Melissa
Zarante, Ignacio
Luquetti, Daniela V.
Eavey, Roland D.
Heike, Carrie L.
Seidman, Jonathan G.
Seidman, Christine E.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Quiat, Daniel
Timberlake, Andrew T.
Curran, Justin J.
Cunningham, Michael L.
McDonough, Barbara
Artunduaga, Maria A.
De Palma, Steven R.
Duenas Roque, Milagros M.
Gorham, Joshua M.
Gustafson, Jonas A.
Hamdan, Usama
Hing, Anne V.
Hurtado Villa, Paula
Nicolau, Yamileth
Osorno, Gabriel
Pachajoa, Harry
Porras Hurtado, Gloria L.
Quintanilla Dieck, Lourdes
Serrano, Luis
Tumblin, Melissa
Zarante, Ignacio
Luquetti, Daniela V.
Eavey, Roland D.
Heike, Carrie L.
Seidman, Jonathan G.
Seidman, Christine E.
dc.subject.es_PE.fl_str_mv Craniofacial microsomia
Ectoderm
FOXI3
Microtia
Neural crest
Microsomía craneofacial
Microtia
Cresta neural
topic Craniofacial microsomia
Ectoderm
FOXI3
Microtia
Neural crest
Microsomía craneofacial
Microtia
Cresta neural
https://purl.org/pe-repo/ocde/ford#3.02.25
dc.subject.ocde.es_PE.fl_str_mv https://purl.org/pe-repo/ocde/ford#3.02.25
description Purpose: Craniofacial microsomia (CFM) represents a spectrum of craniofacial malformations, ranging from isolated microtia with or without aural atresia to underdevelopment of the mandible, maxilla, orbit, facial soft tissue, and/or facial nerve. The genetic causes of CFM remain largely unknown. Methods: We performed genome sequencing and linkage analysis in patients and families with microtia and CFM of unknown genetic etiology. The functional consequences of damaging missense variants were evaluated through expression of wild-type and mutant proteins in vitro. Results: We studied a 5-generation kindred with microtia, identifying a missense variant in FOXI3 (p.Arg236Trp) as the cause of disease (logarithm of the odds = 3.33). We subsequently identified 6 individuals from 3 additional kindreds with microtia-CFM spectrum phenotypes harboring damaging variants in FOXI3, a regulator of ectodermal and neural crest development. Missense variants in the nuclear localization sequence were identified in cases with isolated microtia with aural atresia and found to affect subcellular localization of FOXI3. Loss of function variants were found in patients with microtia and mandibular hypoplasia (CFM), suggesting dosage sensitivity of FOXI3. Conclusion: Damaging variants in FOXI3 are the second most frequent genetic cause of CFM, causing 1% of all cases, including 13% of familial cases in our cohort.
publishDate 2023
dc.date.accessioned.none.fl_str_mv 2023-03-21T17:08:07Z
dc.date.available.none.fl_str_mv 2023-03-21T17:08:07Z
dc.date.issued.fl_str_mv 2023-01
dc.type.es_PE.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.citation.es_PE.fl_str_mv Genetics in Medicine. 2023; 25(1).
dc.identifier.issn.none.fl_str_mv 1098-3600
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12959/3479
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.gim.2022.09.005
identifier_str_mv Genetics in Medicine. 2023; 25(1).
1098-3600
url https://hdl.handle.net/20.500.12959/3479
https://doi.org/10.1016/j.gim.2022.09.005
dc.language.iso.es_PE.fl_str_mv eng
language eng
dc.relation.uri.es_PE.fl_str_mv https://www.sciencedirect.com/science/article/pii/S1098360022009418
dc.rights.es_PE.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.es_PE.fl_str_mv https://creativecommons.org/licenses/by-nc-sa/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/4.0/
dc.format.es_PE.fl_str_mv application/pdf
dc.publisher.es_PE.fl_str_mv American College of Medical Genetics and Genomics
dc.source.none.fl_str_mv reponame:ESSALUD-Institucional
instname:Seguro Social de Salud
instacron:ESSALUD
instname_str Seguro Social de Salud
instacron_str ESSALUD
institution ESSALUD
reponame_str ESSALUD-Institucional
collection ESSALUD-Institucional
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spelling Quiat, DanielTimberlake, Andrew T.Curran, Justin J.Cunningham, Michael L.McDonough, BarbaraArtunduaga, Maria A.De Palma, Steven R.Duenas Roque, Milagros M.Gorham, Joshua M.Gustafson, Jonas A.Hamdan, UsamaHing, Anne V.Hurtado Villa, PaulaNicolau, YamilethOsorno, GabrielPachajoa, HarryPorras Hurtado, Gloria L.Quintanilla Dieck, LourdesSerrano, LuisTumblin, MelissaZarante, IgnacioLuquetti, Daniela V.Eavey, Roland D.Heike, Carrie L.Seidman, Jonathan G.Seidman, Christine E.2023-03-21T17:08:07Z2023-03-21T17:08:07Z2023-01Genetics in Medicine. 2023; 25(1).1098-3600https://hdl.handle.net/20.500.12959/3479https://doi.org/10.1016/j.gim.2022.09.005Purpose: Craniofacial microsomia (CFM) represents a spectrum of craniofacial malformations, ranging from isolated microtia with or without aural atresia to underdevelopment of the mandible, maxilla, orbit, facial soft tissue, and/or facial nerve. The genetic causes of CFM remain largely unknown. Methods: We performed genome sequencing and linkage analysis in patients and families with microtia and CFM of unknown genetic etiology. The functional consequences of damaging missense variants were evaluated through expression of wild-type and mutant proteins in vitro. Results: We studied a 5-generation kindred with microtia, identifying a missense variant in FOXI3 (p.Arg236Trp) as the cause of disease (logarithm of the odds = 3.33). We subsequently identified 6 individuals from 3 additional kindreds with microtia-CFM spectrum phenotypes harboring damaging variants in FOXI3, a regulator of ectodermal and neural crest development. Missense variants in the nuclear localization sequence were identified in cases with isolated microtia with aural atresia and found to affect subcellular localization of FOXI3. Loss of function variants were found in patients with microtia and mandibular hypoplasia (CFM), suggesting dosage sensitivity of FOXI3. Conclusion: Damaging variants in FOXI3 are the second most frequent genetic cause of CFM, causing 1% of all cases, including 13% of familial cases in our cohort.Objetivo: La microsomía craneofacial (CFM) representa un espectro de malformaciones craneofaciales, que van desde la microtia aislada con o sin atresia aural hasta el subdesarrollo de la mandíbula, el maxilar, la órbita, el tejido blando facial y/o el nervio facial. Las causas genéticas de CFM siguen siendo en gran parte desconocidas. Métodos: Realizamos secuenciación del genoma y análisis de ligamiento en pacientes y familias con microtia y CFM de etiología genética desconocida. Las consecuencias funcionales de dañar las variantes sin sentido se evaluaron a través de la expresión de proteínas de tipo salvaje y mutantes in vitro. Resultados: Estudiamos una familia de 5 generaciones con microtia, identificando una variante sin sentido en FOXI3 (p.Arg236Trp) como la causa de la enfermedad (logaritmo de las probabilidades = 3,33). Posteriormente, identificamos a 6 individuos de 3 familias adicionales con fenotipos del espectro microtia-CFM que albergan variantes dañinas en FOXI3 , un regulador del desarrollo ectodérmico y de la cresta neural. Se identificaron variantes sin sentido en la secuencia de localización nuclear en casos con microtia aislada con atresia aural y se encontró que afectaban la localización subcelular de FOXI3. Se encontraron variantes de pérdida de función en pacientes con microtia e hipoplasia mandibular (CFM), lo que sugiere sensibilidad a la dosis de FOXI3 . Conclusión: Las variantes dañinas en FOXI3 son la segunda causa genética más frecuente de CFM y causan el 1 % de todos los casos, incluido el 13 % de los casos familiares en nuestra cohorte.application/pdfengAmerican College of Medical Genetics and Genomicshttps://www.sciencedirect.com/science/article/pii/S1098360022009418info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/4.0/Craniofacial microsomiaEctodermFOXI3MicrotiaNeural crestMicrosomía craneofacialMicrotiaCresta neuralhttps://purl.org/pe-repo/ocde/ford#3.02.25Damaging variants in FOXI3 cause microtia and craniofacial microsomiaLas variantes dañinas en FOXI3 causan microtia y microsomía craneofacialinfo:eu-repo/semantics/articlereponame:ESSALUD-Institucionalinstname:Seguro Social de Saludinstacron:ESSALUDTEXTDamaging variants in FOXI3 cause microtia.pdf.txtDamaging variants in FOXI3 cause microtia.pdf.txtExtracted texttext/plain29496https://repositorio.essalud.gob.pe/bitstream/20.500.12959/3479/3/Damaging%20variants%20in%20FOXI3%20cause%20microtia.pdf.txtf04c8af9c8a1298f52f59d9dd2a888aaMD53THUMBNAILDamaging variants in FOXI3 cause microtia.pdf.jpgDamaging variants in FOXI3 cause microtia.pdf.jpgGenerated Thumbnailimage/jpeg8358https://repositorio.essalud.gob.pe/bitstream/20.500.12959/3479/4/Damaging%20variants%20in%20FOXI3%20cause%20microtia.pdf.jpgc743eb202a88c57e23f29f935f5e63aeMD54ORIGINALDamaging variants in FOXI3 cause microtia.pdfDamaging variants in FOXI3 cause microtia.pdfapplication/pdf1610477https://repositorio.essalud.gob.pe/bitstream/20.500.12959/3479/1/Damaging%20variants%20in%20FOXI3%20cause%20microtia.pdfd529014619a789693c1ff3d1676f96a3MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.essalud.gob.pe/bitstream/20.500.12959/3479/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5220.500.12959/3479oai:repositorio.essalud.gob.pe:20.500.12959/34792023-03-22 03:00:31.649Repositorio Seguro Social de Salud – ESSALUDbibliotecacentral@essalud.gob.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