Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva
Descripción del Articulo
InfluenzaAviruses are often present in environmental and clinical samples at concentrations below the limit of detection (LOD) of molecular diagnostics. Here we report an integrated microfluidic preconcentration and nucleic amplification system (?FPNAS) which enables both preconcentration of influen...
| Autores: | , , , , , , , , , , , |
|---|---|
| Formato: | artículo |
| Fecha de Publicación: | 2020 |
| Institución: | Consejo Nacional de Ciencia Tecnología e Innovación |
| Repositorio: | CONCYTEC-Institucional |
| Lenguaje: | inglés |
| OAI Identifier: | oai:repositorio.concytec.gob.pe:20.500.12390/2582 |
| Enlace del recurso: | https://hdl.handle.net/20.500.12390/2582 https://doi.org/10.3390/mi11020203 |
| Nivel de acceso: | acceso abierto |
| Materia: | Molecular amplification H1N1 Immunomagnetic separation Microfluidic device http://purl.org/pe-repo/ocde/ford#3.03.09 |
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Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
| title |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
| spellingShingle |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva Kim Y. Molecular amplification H1N1 Immunomagnetic separation Microfluidic device http://purl.org/pe-repo/ocde/ford#3.03.09 |
| title_short |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
| title_full |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
| title_fullStr |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
| title_full_unstemmed |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
| title_sort |
Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva |
| author |
Kim Y. |
| author_facet |
Kim Y. Abafogi A.T. Tran B.M. Kim J. Lee J. Chen Z. Bae P.K. Park K. Shin Y.-B. Noort D.V. Lee N.Y. Park S. |
| author_role |
author |
| author2 |
Abafogi A.T. Tran B.M. Kim J. Lee J. Chen Z. Bae P.K. Park K. Shin Y.-B. Noort D.V. Lee N.Y. Park S. |
| author2_role |
author author author author author author author author author author author |
| dc.contributor.author.fl_str_mv |
Kim Y. Abafogi A.T. Tran B.M. Kim J. Lee J. Chen Z. Bae P.K. Park K. Shin Y.-B. Noort D.V. Lee N.Y. Park S. |
| dc.subject.none.fl_str_mv |
Molecular amplification |
| topic |
Molecular amplification H1N1 Immunomagnetic separation Microfluidic device http://purl.org/pe-repo/ocde/ford#3.03.09 |
| dc.subject.es_PE.fl_str_mv |
H1N1 Immunomagnetic separation Microfluidic device |
| dc.subject.ocde.none.fl_str_mv |
http://purl.org/pe-repo/ocde/ford#3.03.09 |
| description |
InfluenzaAviruses are often present in environmental and clinical samples at concentrations below the limit of detection (LOD) of molecular diagnostics. Here we report an integrated microfluidic preconcentration and nucleic amplification system (?FPNAS) which enables both preconcentration of influenza A virus H1N1 (H1N1) and amplification of its viral RNA, thereby lowering LOD for H1N1. H1N1 virus particles were first magnetically preconcentrated using magnetic nanoparticles conjugated with an antibody specific for the virus. Their isolated RNA was amplified to cDNA through thermocycling in a trapezoidal chamber of the ?FPNAS. A detection limit as low as 100 TCID50 (50% tissue culture infective dose) in saliva can be obtained within 2 hours. These results suggest that the LOD of molecular diagnostics for virus can be lowered by systematically combining immunomagnetic separation and reverse transcriptase-polymerase chain reaction (RT-PCR) in one microfluidic device. © 2020 by the authors. |
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2020 |
| dc.date.accessioned.none.fl_str_mv |
2024-05-30T23:13:38Z |
| dc.date.available.none.fl_str_mv |
2024-05-30T23:13:38Z |
| dc.date.issued.fl_str_mv |
2020 |
| dc.type.none.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12390/2582 |
| dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.3390/mi11020203 |
| dc.identifier.scopus.none.fl_str_mv |
2-s2.0-85081271951 |
| url |
https://hdl.handle.net/20.500.12390/2582 https://doi.org/10.3390/mi11020203 |
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2-s2.0-85081271951 |
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eng |
| language |
eng |
| dc.relation.ispartof.none.fl_str_mv |
Micromachines |
| dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess |
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https://creativecommons.org/licenses/by/4.0 |
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openAccess |
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https://creativecommons.org/licenses/by/4.0 |
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MDPI AG |
| publisher.none.fl_str_mv |
MDPI AG |
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reponame:CONCYTEC-Institucional instname:Consejo Nacional de Ciencia Tecnología e Innovación instacron:CONCYTEC |
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CONCYTEC |
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CONCYTEC |
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CONCYTEC-Institucional |
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Publicationrp06643600rp06640600rp06642600rp06646600rp06647600rp06180600rp06641600rp06639600rp06644600rp06638600rp06645600rp06648600Kim Y.Abafogi A.T.Tran B.M.Kim J.Lee J.Chen Z.Bae P.K.Park K.Shin Y.-B.Noort D.V.Lee N.Y.Park S.2024-05-30T23:13:38Z2024-05-30T23:13:38Z2020https://hdl.handle.net/20.500.12390/2582https://doi.org/10.3390/mi110202032-s2.0-85081271951InfluenzaAviruses are often present in environmental and clinical samples at concentrations below the limit of detection (LOD) of molecular diagnostics. Here we report an integrated microfluidic preconcentration and nucleic amplification system (?FPNAS) which enables both preconcentration of influenza A virus H1N1 (H1N1) and amplification of its viral RNA, thereby lowering LOD for H1N1. H1N1 virus particles were first magnetically preconcentrated using magnetic nanoparticles conjugated with an antibody specific for the virus. Their isolated RNA was amplified to cDNA through thermocycling in a trapezoidal chamber of the ?FPNAS. A detection limit as low as 100 TCID50 (50% tissue culture infective dose) in saliva can be obtained within 2 hours. These results suggest that the LOD of molecular diagnostics for virus can be lowered by systematically combining immunomagnetic separation and reverse transcriptase-polymerase chain reaction (RT-PCR) in one microfluidic device. © 2020 by the authors.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengMDPI AGMicromachinesinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/4.0Molecular amplificationH1N1-1Immunomagnetic separation-1Microfluidic device-1http://purl.org/pe-repo/ocde/ford#3.03.09-1Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in salivainfo:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTECORIGINALIntegrated Microfluidic Preconcentration and Nucleic.pdfIntegrated Microfluidic Preconcentration and Nucleic.pdfapplication/pdf2400838https://repositorio.concytec.gob.pe/bitstreams/9460343d-5eff-4f5a-aa10-29ba74e35de7/download6d3dc83c97bc5c366948397059811406MD51TEXTIntegrated Microfluidic Preconcentration and Nucleic.pdf.txtIntegrated Microfluidic Preconcentration and Nucleic.pdf.txtExtracted texttext/plain43650https://repositorio.concytec.gob.pe/bitstreams/d0885a14-8ddd-478a-a024-43292c482e89/download0d1b0a25f989611508ad331b2f44beaaMD52THUMBNAILIntegrated Microfluidic Preconcentration and Nucleic.pdf.jpgIntegrated Microfluidic Preconcentration and Nucleic.pdf.jpgGenerated Thumbnailimage/jpeg5395https://repositorio.concytec.gob.pe/bitstreams/85ebe371-69e3-4b2f-be0b-86e2dc751ed3/download2716ff199f480d9a654c31443477e75bMD5320.500.12390/2582oai:repositorio.concytec.gob.pe:20.500.12390/25822025-01-15 22:00:29.929https://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2info:eu-repo/semantics/openAccessopen accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="6d809ce4-b5c4-4df2-8442-ca3081aa9edb"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Integrated microfluidic preconcentration and nucleic amplification system for detection of influenza a virus H1N1 in saliva</Title> <PublishedIn> <Publication> <Title>Micromachines</Title> </Publication> </PublishedIn> <PublicationDate>2020</PublicationDate> <DOI>https://doi.org/10.3390/mi11020203</DOI> <SCP-Number>2-s2.0-85081271951</SCP-Number> <Authors> <Author> <DisplayName>Kim Y.</DisplayName> <Person id="rp06643" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Abafogi A.T.</DisplayName> <Person id="rp06640" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Tran B.M.</DisplayName> <Person id="rp06642" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Kim J.</DisplayName> <Person id="rp06646" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Lee J.</DisplayName> <Person id="rp06647" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Chen Z.</DisplayName> <Person id="rp06180" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Bae P.K.</DisplayName> <Person id="rp06641" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Park K.</DisplayName> <Person id="rp06639" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Shin Y.-B.</DisplayName> <Person id="rp06644" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Noort D.V.</DisplayName> <Person id="rp06638" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Lee N.Y.</DisplayName> <Person id="rp06645" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Park S.</DisplayName> <Person id="rp06648" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>MDPI AG</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>https://creativecommons.org/licenses/by/4.0</License> <Keyword>Molecular amplification</Keyword> <Keyword>H1N1</Keyword> <Keyword>Immunomagnetic separation</Keyword> <Keyword>Microfluidic device</Keyword> <Abstract>InfluenzaAviruses are often present in environmental and clinical samples at concentrations below the limit of detection (LOD) of molecular diagnostics. Here we report an integrated microfluidic preconcentration and nucleic amplification system (?FPNAS) which enables both preconcentration of influenza A virus H1N1 (H1N1) and amplification of its viral RNA, thereby lowering LOD for H1N1. H1N1 virus particles were first magnetically preconcentrated using magnetic nanoparticles conjugated with an antibody specific for the virus. Their isolated RNA was amplified to cDNA through thermocycling in a trapezoidal chamber of the ?FPNAS. A detection limit as low as 100 TCID50 (50% tissue culture infective dose) in saliva can be obtained within 2 hours. These results suggest that the LOD of molecular diagnostics for virus can be lowered by systematically combining immunomagnetic separation and reverse transcriptase-polymerase chain reaction (RT-PCR) in one microfluidic device. © 2020 by the authors.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1 |
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Nota importante:
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).
La información contenida en este registro es de entera responsabilidad de la institución que gestiona el repositorio institucional donde esta contenido este documento o set de datos. El CONCYTEC no se hace responsable por los contenidos (publicaciones y/o datos) accesibles a través del Repositorio Nacional Digital de Ciencia, Tecnología e Innovación de Acceso Abierto (ALICIA).