Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life

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The project was supported by the German funding program “LOEWE – Landes-Offensive zur Entwicklung Wissenschaftlich-ökonomischer Exzellenz” of the Hessen State Ministry of Higher Education, Research and the Arts. PER also received a scholarship from “CONCYTEC/CIENCIACTIVA: Programa de becas de doctor...

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Detalles Bibliográficos
Autores: Romero, PE, Weigand, AM, Pfenninger, M
Formato: artículo
Fecha de Publicación:2016
Institución:Consejo Nacional de Ciencia Tecnología e Innovación
Repositorio:CONCYTEC-Institucional
Lenguaje:inglés
OAI Identifier:oai:repositorio.concytec.gob.pe:20.500.12390/990
Enlace del recurso:https://hdl.handle.net/20.500.12390/990
https://doi.org/10.1186/s12862-016-0735-8
Nivel de acceso:acceso abierto
Materia:Panpulmonate mitogenomes
panpulmonate lineages
mitochondrial
https://purl.org/pe-repo/ocde/ford#1.06.13
id CONC_1da091af43fb890096cced3bf3fa0bbf
oai_identifier_str oai:repositorio.concytec.gob.pe:20.500.12390/990
network_acronym_str CONC
network_name_str CONCYTEC-Institucional
repository_id_str 4689
dc.title.none.fl_str_mv Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
title Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
spellingShingle Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
Romero, PE
Panpulmonate mitogenomes
panpulmonate lineages
mitochondrial
https://purl.org/pe-repo/ocde/ford#1.06.13
title_short Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
title_full Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
title_fullStr Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
title_full_unstemmed Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
title_sort Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
author Romero, PE
author_facet Romero, PE
Weigand, AM
Pfenninger, M
author_role author
author2 Weigand, AM
Pfenninger, M
author2_role author
author
dc.contributor.author.fl_str_mv Romero, PE
Weigand, AM
Pfenninger, M
dc.subject.none.fl_str_mv Panpulmonate mitogenomes
topic Panpulmonate mitogenomes
panpulmonate lineages
mitochondrial
https://purl.org/pe-repo/ocde/ford#1.06.13
dc.subject.es_PE.fl_str_mv panpulmonate lineages
mitochondrial
dc.subject.ocde.none.fl_str_mv https://purl.org/pe-repo/ocde/ford#1.06.13
description The project was supported by the German funding program “LOEWE – Landes-Offensive zur Entwicklung Wissenschaftlich-ökonomischer Exzellenz” of the Hessen State Ministry of Higher Education, Research and the Arts. PER also received a scholarship from “CONCYTEC/CIENCIACTIVA: Programa de becas de doctorado en el extranjero del Gobierno del Perú” (291-2014-FONDECYT).
publishDate 2016
dc.date.accessioned.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.available.none.fl_str_mv 2024-05-30T23:13:38Z
dc.date.issued.fl_str_mv 2016
dc.type.none.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12390/990
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1186/s12862-016-0735-8
dc.identifier.isi.none.fl_str_mv 400538800027
url https://hdl.handle.net/20.500.12390/990
https://doi.org/10.1186/s12862-016-0735-8
identifier_str_mv 400538800027
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv BMC Evolutionary Biology
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.none.fl_str_mv https://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/4.0/
dc.publisher.none.fl_str_mv BMC
publisher.none.fl_str_mv BMC
dc.source.none.fl_str_mv reponame:CONCYTEC-Institucional
instname:Consejo Nacional de Ciencia Tecnología e Innovación
instacron:CONCYTEC
instname_str Consejo Nacional de Ciencia Tecnología e Innovación
instacron_str CONCYTEC
institution CONCYTEC
reponame_str CONCYTEC-Institucional
collection CONCYTEC-Institucional
repository.name.fl_str_mv Repositorio Institucional CONCYTEC
repository.mail.fl_str_mv repositorio@concytec.gob.pe
_version_ 1844883002271727616
spelling Publicationrp01708500rp02708600rp01709500Romero, PEWeigand, AMPfenninger, M2024-05-30T23:13:38Z2024-05-30T23:13:38Z2016https://hdl.handle.net/20.500.12390/990https://doi.org/10.1186/s12862-016-0735-8400538800027The project was supported by the German funding program “LOEWE – Landes-Offensive zur Entwicklung Wissenschaftlich-ökonomischer Exzellenz” of the Hessen State Ministry of Higher Education, Research and the Arts. PER also received a scholarship from “CONCYTEC/CIENCIACTIVA: Programa de becas de doctorado en el extranjero del Gobierno del Perú” (291-2014-FONDECYT).Background. Transitions from marine to intertidal and terrestrial habitats resulted in a significant adaptive radiation within the Panpulmonata (Gastropoda: Heterobranchia). This clade comprises several groups that invaded the land realm independently and in different time periods, e.g., Ellobioidea, Systellomatophora, and Stylommatophora. Thus, mitochondrial genomes of panpulmonate gastropods are promising to screen for adaptive molecular signatures related to land invasions.Results. We obtained three complete mitochondrial genomes of terrestrial panpulmonates, i.e., the ellobiid Carychium tridentatum, and the stylommatophorans Arion rufus and Helicella itala. Our dataset consisted of 50 mitogenomes comprising almost all major panpulmonate lineages. The phylogenetic tree based on mitochondrial genes supports the monophyly of the clade Panpulmonata. Terrestrial lineages were sampled from Ellobioidea (1 sp.) and Stylommatophora (9 spp.). The branch-site test of positive selection detected significant non-synonymous changes in the terrestrial branches leading to Carychium (Ellobiodea) and Stylommatophora. These convergent changes occurred in the cob and nad5 genes (OXPHOS complex III and I, respectively).Conclusions. The convergence of the non-synonymous changes in cob and nad5 suggest possible ancient episodes of positive selection related to adaptations to non-marine habitats. The positively selected sites in our data are in agreement with previous results in vertebrates suggesting a general pattern of adaptation to the new metabolic requirements. The demand for energy due to the colonization of land (for example, to move and sustain the body mass in the new habitat) and the necessity to tolerate new conditions of abiotic stress may have changed the physiological constraints in the early terrestrial panpulmonates and triggered adaptations at the mitochondrial level.Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica - ConcytecengBMCBMC Evolutionary Biologyinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/4.0/Panpulmonate mitogenomespanpulmonate lineages-1mitochondrial-1https://purl.org/pe-repo/ocde/ford#1.06.13-1Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial lifeinfo:eu-repo/semantics/articlereponame:CONCYTEC-Institucionalinstname:Consejo Nacional de Ciencia Tecnología e Innovacióninstacron:CONCYTEC#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#20.500.12390/990oai:repositorio.concytec.gob.pe:20.500.12390/9902024-05-30 15:23:29.604https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_14cbinfo:eu-repo/semantics/closedAccessmetadata only accesshttps://repositorio.concytec.gob.peRepositorio Institucional CONCYTECrepositorio@concytec.gob.pe#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#<Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="95526963-e1ac-4344-a3b6-c6c2fa5ca42a"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Language>eng</Language> <Title>Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life</Title> <PublishedIn> <Publication> <Title>BMC Evolutionary Biology</Title> </Publication> </PublishedIn> <PublicationDate>2016</PublicationDate> <DOI>https://doi.org/10.1186/s12862-016-0735-8</DOI> <ISI-Number>400538800027</ISI-Number> <Authors> <Author> <DisplayName>Romero, PE</DisplayName> <Person id="rp01708" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Weigand, AM</DisplayName> <Person id="rp02708" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> <Author> <DisplayName>Pfenninger, M</DisplayName> <Person id="rp01709" /> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>BMC</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>https://creativecommons.org/licenses/by/4.0/</License> <Keyword>Panpulmonate mitogenomes</Keyword> <Keyword>panpulmonate lineages</Keyword> <Keyword>mitochondrial</Keyword> <Abstract>Background. Transitions from marine to intertidal and terrestrial habitats resulted in a significant adaptive radiation within the Panpulmonata (Gastropoda: Heterobranchia). This clade comprises several groups that invaded the land realm independently and in different time periods, e.g., Ellobioidea, Systellomatophora, and Stylommatophora. Thus, mitochondrial genomes of panpulmonate gastropods are promising to screen for adaptive molecular signatures related to land invasions.Results. We obtained three complete mitochondrial genomes of terrestrial panpulmonates, i.e., the ellobiid Carychium tridentatum, and the stylommatophorans Arion rufus and Helicella itala. Our dataset consisted of 50 mitogenomes comprising almost all major panpulmonate lineages. The phylogenetic tree based on mitochondrial genes supports the monophyly of the clade Panpulmonata. Terrestrial lineages were sampled from Ellobioidea (1 sp.) and Stylommatophora (9 spp.). The branch-site test of positive selection detected significant non-synonymous changes in the terrestrial branches leading to Carychium (Ellobiodea) and Stylommatophora. These convergent changes occurred in the cob and nad5 genes (OXPHOS complex III and I, respectively).Conclusions. The convergence of the non-synonymous changes in cob and nad5 suggest possible ancient episodes of positive selection related to adaptations to non-marine habitats. The positively selected sites in our data are in agreement with previous results in vertebrates suggesting a general pattern of adaptation to the new metabolic requirements. The demand for energy due to the colonization of land (for example, to move and sustain the body mass in the new habitat) and the necessity to tolerate new conditions of abiotic stress may have changed the physiological constraints in the early terrestrial panpulmonates and triggered adaptations at the mitochondrial level.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication> -1
score 13.413286
Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
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