Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)

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In order to analyze transferibility of 15 microsatellite primers from Fabaceae family to Lupinus mutabilis Sweet "andean lupine" chosen to present transferability between species and genera, by its high rate of polymorphic content (PIC) and high degree of observed and expected heterozygosi...

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Detalles Bibliográficos
Autores: Chirinos-Arias, Michelle C., Jiménez, Jorge E.
Formato: artículo
Fecha de Publicación:2015
Institución:Universidad Nacional de Trujillo
Repositorio:Revista UNITRU - Scientia Agropecuaria
Lenguaje:español
OAI Identifier:oai:ojs.revistas.unitru.edu.pe:article/811
Enlace del recurso:http://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/811
Nivel de acceso:acceso abierto
Materia:Lupinus mutabilis
familia Fabaceae transferencia
marcadores moleculares microsatélites
Fabaceae family
transference
microsatellite molecular markers
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spelling Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)Transferencia de algunos marcadores moleculares microsatélites de la familia Fabaceae en tarwi (Lupinus mutabilis Sweet)Chirinos-Arias, Michelle C.Jiménez, Jorge E.Lupinus mutabilisfamilia Fabaceae transferenciamarcadores moleculares microsatélitesLupinus mutabilisFabaceae familytransferencemicrosatellite molecular markersIn order to analyze transferibility of 15 microsatellite primers from Fabaceae family to Lupinus mutabilis Sweet "andean lupine" chosen to present transferability between species and genera, by its high rate of polymorphic content (PIC) and high degree of observed and expected heterozygosity. DNA was extracted of 300 andean lupines plants, PCR conditions were standardized by gradients of master mix components. Primers for screening were run on 3% agarose gel with some samples. Finally population was amplified and run on 6% polyacrylamide gel for its highest resolution. Only 6.67% of primers were amplified, but they were monomorphic, so they cannot be used for molecular characterization. We proposed eight microsatellite primers for andean lupin wich should be probed in laboratory conditions.Con el objetivo de analizar la transferencia de 15 iniciadores microsatélites de la familia Fabaceae en Lupinus mutabilis Sweet "tarwi", escogidos por presentar transferibilidad entre especies y géneros, por su alto índice de contenido polimórfico (PIC) y alto grado de heterocigosidad observada y esperada. Se extrajo el ADN de 300 plantas de tarwi, se estandarizaron las condiciones PCR haciendo gradientes de los diferentes componentes del master mix. Para el screening se corrieron los iniciadores en gel de agarosa 3% con algunas muestras. Finalmente se amplificó la población y se corrieron en gel de poliacrilamida 6% por su mayor resolución. Sólo el 6,67% de iniciadores amplificaron pero resultaron ser monomórficos, por lo que no pueden usarse en caracterización molecular. Se propone ocho iniciadores microsatélites para tarwi, los cuales deben ser probados en condiciones de laboratorio.Universidad Nacional de Trujillo2015-03-31info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/81110.17268/sci.agropecu.2015.01.05Scientia Agropecuaria; Vol. 6 No. 1 (2015): January - March; 51-58Scientia Agropecuaria; Vol. 6 Núm. 1 (2015): Enero - Marzo; 51-582306-67412077-9917reponame:Revista UNITRU - Scientia Agropecuariainstname:Universidad Nacional de Trujilloinstacron:UNITRUspahttp://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/811/740http://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/811/1360Derechos de autor 2015 Scientia Agropecuariainfo:eu-repo/semantics/openAccess2021-06-01T15:35:20Zmail@mail.com -
dc.title.none.fl_str_mv Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
Transferencia de algunos marcadores moleculares microsatélites de la familia Fabaceae en tarwi (Lupinus mutabilis Sweet)
title Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
spellingShingle Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
Chirinos-Arias, Michelle C.
Lupinus mutabilis
familia Fabaceae transferencia
marcadores moleculares microsatélites
Lupinus mutabilis
Fabaceae family
transference
microsatellite molecular markers
title_short Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
title_full Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
title_fullStr Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
title_full_unstemmed Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
title_sort Transference of some microsatellite molecular markers from Fabaceae family to Andean Lupin (Lupinus mutabilis Sweet)
dc.creator.none.fl_str_mv Chirinos-Arias, Michelle C.
Jiménez, Jorge E.
author Chirinos-Arias, Michelle C.
author_facet Chirinos-Arias, Michelle C.
Jiménez, Jorge E.
author_role author
author2 Jiménez, Jorge E.
author2_role author
dc.subject.none.fl_str_mv Lupinus mutabilis
familia Fabaceae transferencia
marcadores moleculares microsatélites
Lupinus mutabilis
Fabaceae family
transference
microsatellite molecular markers
topic Lupinus mutabilis
familia Fabaceae transferencia
marcadores moleculares microsatélites
Lupinus mutabilis
Fabaceae family
transference
microsatellite molecular markers
dc.description.none.fl_txt_mv In order to analyze transferibility of 15 microsatellite primers from Fabaceae family to Lupinus mutabilis Sweet "andean lupine" chosen to present transferability between species and genera, by its high rate of polymorphic content (PIC) and high degree of observed and expected heterozygosity. DNA was extracted of 300 andean lupines plants, PCR conditions were standardized by gradients of master mix components. Primers for screening were run on 3% agarose gel with some samples. Finally population was amplified and run on 6% polyacrylamide gel for its highest resolution. Only 6.67% of primers were amplified, but they were monomorphic, so they cannot be used for molecular characterization. We proposed eight microsatellite primers for andean lupin wich should be probed in laboratory conditions.
Con el objetivo de analizar la transferencia de 15 iniciadores microsatélites de la familia Fabaceae en Lupinus mutabilis Sweet "tarwi", escogidos por presentar transferibilidad entre especies y géneros, por su alto índice de contenido polimórfico (PIC) y alto grado de heterocigosidad observada y esperada. Se extrajo el ADN de 300 plantas de tarwi, se estandarizaron las condiciones PCR haciendo gradientes de los diferentes componentes del master mix. Para el screening se corrieron los iniciadores en gel de agarosa 3% con algunas muestras. Finalmente se amplificó la población y se corrieron en gel de poliacrilamida 6% por su mayor resolución. Sólo el 6,67% de iniciadores amplificaron pero resultaron ser monomórficos, por lo que no pueden usarse en caracterización molecular. Se propone ocho iniciadores microsatélites para tarwi, los cuales deben ser probados en condiciones de laboratorio.
description In order to analyze transferibility of 15 microsatellite primers from Fabaceae family to Lupinus mutabilis Sweet "andean lupine" chosen to present transferability between species and genera, by its high rate of polymorphic content (PIC) and high degree of observed and expected heterozygosity. DNA was extracted of 300 andean lupines plants, PCR conditions were standardized by gradients of master mix components. Primers for screening were run on 3% agarose gel with some samples. Finally population was amplified and run on 6% polyacrylamide gel for its highest resolution. Only 6.67% of primers were amplified, but they were monomorphic, so they cannot be used for molecular characterization. We proposed eight microsatellite primers for andean lupin wich should be probed in laboratory conditions.
publishDate 2015
dc.date.none.fl_str_mv 2015-03-31
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/811
10.17268/sci.agropecu.2015.01.05
url http://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/811
identifier_str_mv 10.17268/sci.agropecu.2015.01.05
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv http://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/811/740
http://revistas.unitru.edu.pe/index.php/scientiaagrop/article/view/811/1360
dc.rights.none.fl_str_mv Derechos de autor 2015 Scientia Agropecuaria
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Derechos de autor 2015 Scientia Agropecuaria
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidad Nacional de Trujillo
publisher.none.fl_str_mv Universidad Nacional de Trujillo
dc.source.none.fl_str_mv Scientia Agropecuaria; Vol. 6 No. 1 (2015): January - March; 51-58
Scientia Agropecuaria; Vol. 6 Núm. 1 (2015): Enero - Marzo; 51-58
2306-6741
2077-9917
reponame:Revista UNITRU - Scientia Agropecuaria
instname:Universidad Nacional de Trujillo
instacron:UNITRU
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collection Revista UNITRU - Scientia Agropecuaria
instname_str Universidad Nacional de Trujillo
instacron_str UNITRU
institution UNITRU
repository.name.fl_str_mv -
repository.mail.fl_str_mv mail@mail.com
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